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Marine Microbe Contains Multitudes
… and colleagues set sail on research cruises in 2015 and 2016. At Station ALOHA , site of the 30-years-long Hawaii … was supported by grants from the Simons Foundation (#329108 and #721223 to EFD) and Gordon and Betty Moore … User Facility, is supported under contract number DE-AC02-05CH11231. This work is a contribution of the Simons …
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Eelgrass Proves to Be Much Younger Than We Thought
… its history. Their research, published in  August 2023 in  Nature Plants , was able to assess absolute time … the southern California and Mexican coastlines. Roughly 100,000 years later, that Japanese eelgrass crossed the … Institute Community Sequencing Program (CSP 502951, 2016, Population and evolutionary genomics of host–microbiome …
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Ian Blaby
… metabolism in cyanobacteria Nature Communications 15(1) 3167. 2024 Simirenko et al ., gRNA-SeqRET: a universal tool for … cell and metabolic differentiation. The Plant Cell . 27: 10, 2743-2769. 2015 Blaby et. al., The Chlamydomonas genome …
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JGI Interns at UC Merced Earn CAMP Merit Awards
… technology, engineering and math (STEM) fields. At the 2016 CAMP Statewide Undergraduate Research Symposium , held … the 99 students who attended, representing 9 UC campuses, 10 special merit posters/presenters and 10 honorable mentions were recognized. The 5 UC Merced …
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A Collaboration to Improve Plant Genome Annotations Across Species
… targets for plant improvement. Surprisingly, about 16 to 56 percent of plant genes are poorly characterized, … Avinash: In the initial planning phase, there were about 10 groups that came together to standardize the experimental protocols. Then, in 2020, seven more groups joined the project to contribute to …
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Digging into Microbial Ecosystems Deep Underground
National Laboratory. Letters of Intent are due March 16, 2022 to freely access resources at multiple DOE user …
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JGI@25: The Human Genome Project, or the JGI’s Origin Story
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that … Los Alamos National Lab researchers investigated Chromosome 16, which contains about 3% of the human genome. They wanted … of human chromosome 19 . Nature. 428, 529–535 (2004). doi:10.1038/nature02399 Schmutz, J., Martin, J., Terry, A. et …
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Designer DNA: JGI Helps Users Blaze New Biosynthetic Pathways
… collaboration has been incredibly productive; more than 10 papers, including two Nature Plants publications, in five … Institute of Aquatic Science and Technology in September 2021. Robinson stressed that the DNA Synthesis Science team’s …
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UC Merced Interns Reflect on Their JGI Summer Projects
Over the course of eight weeks this past summer, 10 students from UC Merced worked closely with JGI … short videos highlighting the exciting work done by the 2020 cohort of JGI-UC Merced interns .   by: Ashleigh Papp … …
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Microbiome Data Science Team
… of new viral genomes and their predicted hosts (Nature 2016, Science 2017, Nature Microbiology 2018), discovery of … and visualization of big data. … Pavlopoulos GA et al. (2023) Unraveling the functional dark matter through global … from the human gut microbiome. Nature Biotechnol.  39(1):105-114. Schulz F, et al. (2020) Giant virus diversity and …
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David Goodstein
… manufacturer KLA-Tencor before joining the JGI in 2002. Initially focused on building tools to facilitate expert … PhD in Physics, Cornell University, NY … RJ Craig et al., 2023.The Chlamydomonas Genome Project, version 6: Reference … across the plant kingdom. Nucleic acids research 51 (16), 8383-8401. JT Lovell et al., 2022. GENESPACE tracks …
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