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Dealing with Drought: Uncovering Sorghum’s Secrets
… site and then collect and process the samples starting at 10am Pacific time. JGI researchers helped develop the … datasets. The results from the first year showed that 10,727 genes or 44% of expressed genes respond to drought … supported by the Office of Science of the DOE Contract DE-AC02-05CH11231. D.P. is supported in part by the Berkeley …
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Calculating the Costs of Multiple Switchgrass Gene Copies
… (in this case, a plant’s complete genetic makeup) and 10 common gardens. We discovered that 8X populations have …
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Microbiome Data Science Team
… and visualization of big data. … Pavlopoulos GA et al. (2023) Unraveling the functional dark matter through global … from the human gut microbiome. Nature Biotechnol.  39(1):105-114. Schulz F, et al. (2020) Giant virus diversity and … of the global human gut microbiome. Nature   568(7753):505-510 Amann R. et al (2019) Toward unrestricted use of public …
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New Vision, New Mission, New Plan: The JGI’s Next Five Years
Serve the Changing Planet (download a copy at jointgeno.me/2024StrategicPlan .) This plan aligns the DOE Office of … In service of solutions that will impact society, the 2024 strategic plan introduces the JGI’s new vision to lead … path, has previously proven successful; in the 2018-2023 five-year strategic plan, the JGI accomplished 90% …
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Picking Up Threads of Cotton Genomics
… out of the green pods in every direction. There are 100 million families around the world whose livelihoods … lineages. Senior authors of the  paper published April 20, 2020 in  Nature Genetics include Jane Grimwood and Jeremy … these things take not five or eight years, but sometimes 10 or 15 years, because the technology develops over time.” …
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Getting to the Bottom of Fungal Functions Across Earth’s Forests
… four forests, researchers have leveraged data from the 1000 Fungal Genomes project to form new connections between … when we mapped the first sequenced RNA from the soil, only 10% of them were mapping to the fungal genomes at the JGI,” … tropics.”  Francis Martin will be a keynote speaker at the 2024 DOE Joint Genome Institute (JGI) Annual Genomics of …
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Events
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Crysten Blaby-Haas
Blaby-Haas joined the JGI in 2022 as lead of the Biomolecular Materials Initiative, a … the heme-binding split-barrel family. J Biol Chem  300(11), 107888. Grosjean N, Yee EF, Kumaran D, Chopra K, Abernathy … aminopeptidase. Cell Reps 39 (7), 110834. (Subject of News and Views Article in Nature 608, 38-39 (2022) and …
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A Collaboration to Improve Plant Genome Annotations Across Species
Avinash: In the initial planning phase, there were about 10 groups that came together to standardize the experimental protocols. Then, in 2020, seven more groups joined the project to contribute to …
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NeLLi — Symposium on New Lineages of Life
The DOE Joint Genome Institute hosted the hybrid “NeLLi 2023 Symposium” delving into the most recent expansions of … as well as biotechnology. NeLLi August 24 – 25, 2023 Session Speakers:   Laura Hug , University of Waterloo …
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Fields of Breeders’ Dreams: A Team Effort Toward Targeted Crop Improvements
… switchgrass ( Panicum virgatum ), which has established 10 experimental gardens located in eight states spread across 1,100 miles. Switchgrass is a perennial grass that quickly … from half of the United States. As  reported January 27, 2021 in  Nature , the team led by researchers at the …
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JGI Welcomes New UEC Members
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