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Functional Gene Losses Occur with Minimal Size Reduction in the Plastid Genome of the Parasitic Liverwort Aneura mirabilis
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
… of years, underground fungi have lived in symbiosis with plant roots. Plants provide photosynthesized carbon, while … In order to do so, these organisms share space at cellular scale: fungi stretch a network of tendrils called … This team quantified the expression of over 12,000 fungal genes, in addition to associated plant genes.  All together, …
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Evidence-based green algal genomics reveals marine diversity and ancestral characteristics of land plants
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Natural Prodcast Episode 15: Katherine Duncan
… though I’ve always lived by the sea in the northeast of Scotland. It was actually when I was traveling at the end of … I was imagining some massive contraption for amplifying genes. I wasn’t really sure what actinobacteria were. Dan … transcriptomics, metabolomics, and natural products in plants, fungi, and microorganisms. If you want to …
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High-Throughput Single-Cell Transcriptome Profiling of Plant Cell Types
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User Advisory Committees
… The Plant Program Advisory Committee is chartered to offer … Plant Program User Advisory Committee …
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Complete Genome of Oil-Rich Alga Reveals Ideal Platform for Bioengineering
… targeting in the genome in the November 2025 issue of The Plant Cell. Auxenochlorella is an allodiploid hybrid of two … Also notable, researchers found it is missing 33 genes thought essential for photosynthesis, yet still … be deleted opens new engineering possibilities. The rapid evolution observed suggests directed evolution could quickly …
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A Collaboration to Improve Plant Genome Annotations Across Species
… To provide broad plant genomic capabilities, the DOE Joint Genome Institute … the complete set of RNA molecules transcribed from all the genes within a cell or tissue at a specific time or under … allowed us to pinpoint and rank biologically relevant and evolutionarily conserved genes that could be potential …
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Natural Prodcast Episode 8: Eric Schmidt
… They’re at the base of the animal kingdom, in terms of evolution. Because they’re sitting there, they tend to have … really need to know how they’re made. You need to bring the genes into the lab, and you need to manipulate them in the … transcriptomics, metabolomics, and natural products in plants, fungi, and microorganisms. If you want to …
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Metabolomics
… samples, including organisms (e.g. microbes, fungi, plant), media in which they grow, as well as different types …
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Tracing the Evolution of Shiitake Mushrooms
… decomposers that can break down all of wood’s components — cellulose, hemicellulose, and the toughest molecule, lignin. Understanding Lentinula genomes and their evolution could provide strategies for converting plant waste into sugars for  biofuel production. …
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Industry Engagement Program
… including User Facilities like the JGI, through its Genesis Mission. Launched in 2025, the initiative aims to … and AI agents to solve key national challenges. The Genesis Mission consortium will connect leading industry and … Facultative Methylotroph technology — interact with rice plants. Using the JGI’s fabricated ecosystem technology ( …
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