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Doubling Down on Known Protein Families
… a team of scientists at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab), and collaborators across … Harnessing the collective power of more than 26,000 microbiome datasets, all accessible through the publicly …
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GNPS Dashboard: collaborative exploration of mass spectrometry data in the web browser
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Microbiome Data Science: Understanding Our Microbial Planet
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A data analysis and coordination center for the human microbiome project
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A Better Way to Find RNA Virus Needles in the Proverbial Database Haystacks
… led by researchers at Tel Aviv University in Israel, the National Center for Biotechnology Information, and the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … together, learned from JGI’s Nikos Kyrpides that his Microbiome Data Science group was also working on RNA virus …
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Examples: Successful LOIs & Submissions
… from the PIs who drafted them.  … Elucidating Sphagnum microbiome genetic interactions for improved growth at …
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Natural Prodcast Episode 3: The Primer, Part 3
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about … probably been since the last decade. We have a lot more data. Obviously, there’s been a lot of sequencing going on, … of Science User Facility located at Lawrence Berkeley National Lab. You can find links to transcripts, more …
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Recruiting Human Microbiome Shotgun Data to Site-Specific Reference Genomes
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Workforce Development & Education Outreach
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Uncovering Novel Genomes from Earth’s Microbiomes
Biotechnology . Known as the GEM (Genomes from Earth’s Microbiomes) catalog, this work results from a collaboration … researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab), and the  DOE Systems …
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Natural Prodcast Episode 22: Alison Narayan
… was dual, the beauty of the structures and also the challenge and thinking about making them. So I really came at … so starting from some of the enzymes that we had the most data on and knew the most about, working with my … You can really design your experiments in a way that’s data rich, and you can really just learn so much, which then …
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Natural Prodcast Episode 23: Aaron Puri
… thing I’ve learned is that when JGI gives you a ton of data you better have someone really smart to be able to … with we picked 183 of them. And we sent that list to the Joint Genome Institute, and they were able to synthesize the … project his name is Dale Pelletier and he’s from Oak Ridge National Lab . He’s an amazing microbiologist. And some of …
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