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Natural Prodcast Episode 18: A CSP Primer
… a Genome Insider listener, then you’ll recognize this material, though my show is a little more free-form, and … the user programs at the JGI, and I’m also the head of the microbial genome program. And I’m a scientist here. And have … We don’t want to get a proposal that’s just asking for 20 microbial genomes. That is not a good fit for our annual CSP …
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Natural Prodcast Episode 21: Elizabeth Parkinson
… outreach program to get kids interested in microbiology and microbial chemistry. All good stuff, and I hope you enjoy … to these receptors. When they do that, they have a conformational change which causes them to essentially fall off … one of the things I got frustrated with is how little material you could get out. And so one of the things that I …
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The Power of One, Amplified
… nearly 500 single cells from a single low diversity hot spring sediment sample. Their work showed that single cell … of bioinformatics tools for  extracting snippets of microbial genomes directly from environmental sequence data, …
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Frequently Asked Questions: Project Management
… ” page in your account. Use the form to update all information except email address. To update your email address, … maintain DNA, cultures or stocks of any organisms. These materials should be obtained by contacting the collaborator … for functional annotation/curation of your genomes Microbial (IMG–ER) Metagenome and Single Cell (IMG/ M-ER) …
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Natural Prodcast Episode 19: Bill Fenical
… about. It’s sort of early stages. But I think that is emblematic of some of the research that you’ve been doing the … powerful people. These were people that really controlled microbial drug discovery. And a guy like me, with no … media. So we started using a whole bunch of polysaccharides. We cultured things with fish meal, seaweed paste. I …
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Millimeter‐scale genetic gradients and community‐level molecular convergence in a hypersaline microbial mat
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Metagenomics reveals niche partitioning within the phototrophic zone of a microbial mat
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Institutional User Agreements
… will be required to assume responsibility for all material transfers. *University of California Campus : An … in addition to an active 2024 User Agreement or JGI BDLUA. MATERIAL TRANSFER AGREEMENT (MTA):  Before work can begin, … submitting researcher, and by LBNL. The Uniform Biological Material Transfer Agreement (UBMTA) and UBMTA Implementing …
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An Automated Tool for Assessing Virus Data Quality
… and best practices for characterizing uncultivated viruses. Following up on those guidelines, JGI researchers … the genomes of these viruses and associate them with their microbial hosts. However, assembling viral genomes from … of metagenome-assembled viral genomes, including estimation of genome completeness and removal of contamination …
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Hydrogen production in photosynthetic microbial mats in the Elkhorn Slough estuary, Monterey Bay
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Marsarchaeota are an aerobic archaeal lineage abundant in geothermal iron oxide microbial mats
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Metabolomics Technology Group
… direct biochemical datasets to improve our understanding of microbial metabolism. Of particular interest is …
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