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Finding the Fermenters
… including the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … browser that allows other researchers to study the genomes and predict the metabolic abilities of these … from the literature. They then used the JGI’s GOLD and IMG data portals to get information about the genomes and …
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JGI@25: Strengthening Soybean
… and energy advantages explain why soybean is a flagship genome of the JGI’s Plant Program.    While soybean has … niche market for soybean.”  Upon its initial release in 2009, the soybean genome sequence immediately spurred further … soybean genome sequence and ASR in this JGIota, a Genome Insider podcast minisode.)  In 2016, the JGI accepted a …
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Len Pennacchio
… In 2003, Dr. Pennacchio joined the DOE Joint Genome Institute and has focused on applying … joint appointments as a Deputy Director at the DOE Joint Genome Institute, Senior Scientist at Lawrence Berkeley … at UC Berkeley. Dr. Pennacchio received his Ph.D in 1998 from the Department of Genetics at Stanford University …
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JGI@25: Using Team Science to Build Communities Around Data
… represents affiliations at over 180 organizations in 29 U.S. states and 35 countries. (Graphic: Neil Byers) The JGI launched the 1000 Fungal Genomes (1KFG) Project through a 2012 Community Science … of fungal phenotypes and a myriad of ecologies.” The Open Green Genomes Initiative is the product of a 2018 Community …
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Accessibility/Section 508 Statement
… in accordance with Section 508 of the Rehabilitation Act (29 U.S.C. 794d), as amended in 1998.   Send feedback or concerns related to the …
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Nikos Kyrpides
… Dr. Kyrpides joined the DOE Joint Genome Institute in 2004 to lead the Genome Biology Program and the development of the … analysis platforms for microbial genomes and metagenomes (IMG). He became the Metagenomics Program head in 2010 and … (2021) CheckV assesses the quality and completeness of metagenome-assembled viral genomes. Nature Biotechnol . …
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New Lineages of Life Group
… discovering and characterizing giant viruses, which possess genomes and particle sizes that rival those of cellular … conclusions .”  Nature Communications Volume 15 Article 9873. Buscaglia, M. et all (2024) “ Adaptation strategies of … Conservative taxonomy and quality assessment of giant virus genomes with GVClass. ”  npj Viruses, Volume 2 Article 60. …
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Anuvia taps JGI for expertise to pinpoint products from beneficial soil microbes
… water resources and restoring and maintaining healthy soils – are at the heart of sustaining food and bioenergy … producing bio-based plant nutrition products that target soil enrichment, is partnering with the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User …
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Green genes from blue greens: challenges and solutions to unlocking the potential of cyanobacteria in drug discovery
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From Competition to Cooperation
… lineages. The Science By comparing 135 fungal sequenced genomes, researchers were able to carry out a broader … validate how mycorrhizal fungi play an integral role in soil carbon storage. Summary There are three types of fungal … 62 mycorrhizal species. The 62 mycorrhizal species include 29 newly-sequenced mycorrhizal genomes. With so many fungal  …
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Genomic Analysis of Organismal Complexity in the Multicellular Green Alga Volvox carteri
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Green Evolution and Dynamic Adaptations Revealed by Genomes of the Marine Picoeukaryotes Micromonas
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