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… photosynthesizing organisms called phytoplankton (from the Greek phyto for ‘plant’ and planktos for … UEA and including the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … in algal communities, including the algae-associated microbiomes that influence algal diversity and gene …

… and bioproducts. By sequencing and analyzing the genomes of these organisms, the program investigates the … culture collections to produce hundreds of diverse algal genomes, which will be made accessible through the PhycoCosm … portal. The Fungal & Algal Program aims to streamline genome analysis workflows for microbial eukaryotes, build …

… EcoFAB. These small plastic growth chambers let researchers around the world compare their work consistently. And EcoFABs also work well in the classroom. This episode, we visit Los Medanos Community College to see …

… Nikos Kyrpides , mining the Integrated Microbial Genomics & Microbiomes (IMG/M) system’s immense collection of publicly … is a pioneer in metagenomic studies, recovering microbial genomes from biofilm samples at the Richmond Mine in Iron … for Some Type V CRISPR-Cas Systems Mol Cell. 2020 Aug 6;79(3):416-424.e5. doi: 10.1016/j.molcel.2020.06.022. Wright AV …

… processes for the first time. By collecting data from 27 different poplar ( Populus trichocarpa ) trees, as … were provided by the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … Laboratory (Berkeley Lab). All of this information — 318 metagenomes, 98 plant transcriptomes and 314 metabolomic …

… across multiple fungal lineages. The Science By comparing 135 fungal sequenced genomes, researchers were able to carry out a broader … , the work was led by a consortium of researchers from the French National Institute for Agriculture, Food and … project was funded by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, and …

… in 15 individual classrooms across the country, training 316 students in fungal biology, bioinformatics, and … involving academic faculty and researchers at the DOE Joint Genome Institute (JGI), a DOE Office of Science User … biology analysis. KBase also supports  MICROnet (Microbiomes In Computational Research Opportunities …

… and released by the US Department of Energy (DOE) Joint Genome Institute (JGI) are subject to the following Data … made publicly available on relevant JGI portals (i.e. JGI Genome/Data Portal, MycoCosm, PhycoCosom, Phytozome, or IMG) … repositories),  (2) PI request to list data publicly, (3) at the end of the embargo period. If data or analyses of …

… root cells, and both organisms rearrange their cells around this structure to facilitate sharing.  Recently, … scientist at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … as a reservoir for carbon compounds that plants generate from carbon dioxide they take in. In this way, encouraging …