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Uncovering Novel Genomes from Earth’s Microbiomes
… they may have in a wide range of research fields. A public repository of 52,515 microbial draft genomes … microbes in the lab,” noted Stephen Nayfach, the study’s first author and research scientist in Nikos Kyrpides’  … A New Path for Metagenomics Researchers Building upon these resources, KBase, a multi-institutional collaborative …
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First Monoploid Reference Sequence of Sugarcane
… Sorghum genome serves as a reference for the highly complex sugarcane genome . The Science Most … team of researchers has successfully assembled a first monoploid reference sequence using a targeted approach … and assembling fragments of sugarcane chromosomes into the first monoploid reference of the gene-rich part of the …
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Building Sphagnum Genomic Resources
… Program (CSP), researchers are developing a number of resources to build up Sphagnum as a plant model system focused on carbon cycling studies, rather than for food or fuel applications. The Impact Sphagnum’s impact … magellanicum genome is currently being assembled. These resources would provide the research community with the …
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The secondary metabolism collaboratory: a database and web discussion portal for secondary metabolite biosynthetic gene clusters
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Webinar: SIP technologies at EMSL and JGI
… such as DNA-SIP, Protein SIP, Flux Balance analysis with metabolites, Isotope Ratio Mass Spectrometry, NanoSIMS, and … from the Webinar: 1. Q(uestion): How much DNA is required for the JGI SIP metagenomics pipeline? A(nswer):  The more … takes a few months to go from start to finish, i.e., QC to separation to library sequencing and assembly. Like others, …
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JGI@25: Tracking & Subduing the Plague of California’s Oak Woodlands
… energy and environmental challenges.   Scanning the California oak woodlands from the air, large swaths of the … Polytechnic Institute State University, was released to the public in a highly-cited 2006 publication in the journal … SOD infection analysis. These collaborations represent the first-ever large-scale “citizen science” project to generate …
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Natural Prodcast Episode 22: Alison Narayan
… the series of interviews we recorded at the Society for Industrial Microbiology and Biotechnology (SIMB) Natural … NARAYAN: I think that’s fair. And I always use it as the first word in the title of my talk, 100% fair for you to … you can’t get to the second part without exploring the first part. And so I would say we don’t necessarily develop …
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Microbial secondary metabolites: advancements to accelerate discovery towards application
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A Simple and Versatile Cell-Free Expression Method for Producing Secondary Metabolites
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Long-read metagenomics of soil communities reveals phylum-specific secondary metabolite dynamics
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Novel soil bacteria possess diverse genes for secondary metabolite biosynthesis
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Yasuo Yoshikuni
… has been head of the DNA Synthesis Science Program since 2015. The mission of this program is to harness the power of DNA synthesis, strain engineering, and biosystems design for DOE-mission-relevant discovery and applications. This … unique sugar polymers in macroalgae and developing the first microbial platform technologies unlocking the …
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