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Verrucomicrobia are prevalent in north-temperate freshwater lakes and display class-level preferences between lake habitats
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A Better Way to Find RNA Virus Needles in the Proverbial Database Haystacks
… data sets, their work may be akin to finding a single snowflake on a colored-in page of that book. Published online … and viruses vastly outnumber the microbes. Advances in sequencing technologies and computational tools have … it’s unclear why this is so rarely detected.” Developing Approaches for Reconciling “Real” Big Data For the team, the …
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User Support
… that will be subject to the DOE JGI’s capabilities for sequencing, synthesis and/or metabolomics. Once materials … issues that may arise. You may monitor the status of your sequencing project at any time by logging on to the Genome Portals using your JGI login. After sequencing/metabolomics has completed, your Project Manager …
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Sequencing crop genomes: approaches and applications
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Effects of Polar Light Cycle on Microbial Food Web
Populations of Antarctic lake microbial communities change with the seasons. The … Light-harvesting bacteria (phototrophs) in Antarctica’s Ace Lake defy the norm when it comes to nutrient cycling in … over a 10-year period and sent to JGI for metagenomic sequencing. A study  recently published in  Microbiome shows …
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Antarctic lake viromes reveal potential virus associated influences on nutrient cycling in ice-covered lakes
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Natural Prodcast Episode 18: A CSP Primer
Science program. It used to actually stand for Community Sequencing Program. Also CSP, same acronym. But as JGI, as a … facility, evolved, and as we started to do more than just sequencing, we thought the name community sequencing program is really not appropriate anymore. And so …
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The More the Merrier: Making the Case for Plant Pan-genomes
… species and, consequently, the evolution of polyploidy.” Evaluating Polyploid Genomes in a Pan-genomic Context For … and cleanup. The JGI provides integrated high-throughput sequencing and computational analysis that enable systems-based scientific approaches to these challenges.  DOE’s Office of Science is …
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Draft Genome Sequences of Gammaproteobacterial Methanotrophs Isolated from Lake Washington Sediment
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Seven genome sequences of bacterial, environmental isolates from Pony Lake, Antarctica.
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Partial genome sequence of the haloalkaliphilic soda lake bacterium Thioalkalivibrio thiocyanoxidans ARh 2T
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Enlarging Windows into Understanding Gene Functions
… genes are turned on is known as DNA affinity purification sequencing or DAP-seq. The technology was developed by Ronan … by co-first authors Leo Baumgart and Juna Lee developed two approaches that build upon the DAP-seq technology O’Malley … of a streamlined workflow that reduces the time and cost associated with this purification step, and Baumgart …
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