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Innovative Technology Improves Our Understanding of Bacterial Cell Signaling
… is found in nearly all types of bacteria and interacts with cell signaling networks that control many basic cellular … Additionally, it opens the door to measuring real-time changes in cyclic di-GMP via live cell imaging. Summary … were synthesized as codon optimized sequences and cloned into the Nano-lantern scaffold. Because the biosensors …
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Chapter One Structural, Mechanistic and Genomic Insights into OCP-Mediated Photoprotection
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Engagement Webinar: What Can You Do With An Approved CSP Functional Genomics Call Proposal?
… [DNA Synthesis Science Head] Yasuo [Yoshikuni] gave back in 2016.” Alper’s first approved JGI proposal came through the … the University of California, Davis. “The work with JGI was one of the first things we actually started doing when … first. Prospective users are always welcome to contact one of us about possible proposals if it’s different from …
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You Can Move, But You Can’t Hide
… entities that seek to replicate themselves and spread from cell to cell. Two of the most common forms of MGEs are … distinct approaches to identify both viruses and plasmids; one is marker gene-based, and the second is a neural network … to become an essential tool for researching global viral diversity. geNomad has already been downloaded thousands of …
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Does time matter? Intraspecific diversity of ribosomal RNA genes in lineages of the allopolyploid model grass Brachypodium hybridum with different evolutionary ages
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Genome‐wide associations with flowering time in switchgrass using exome‐capture sequencing data
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Extracting the Secrets of Secondary Metabolites
… As a demonstration, the researchers used CRAGE-CRISPR for discovering active secondary metabolites and helping them … hit the scene in 2019. Now, that power is poised to grow exponentially by combining it with CRISPR.  By employing CRAGE, … That work by JGI researchers was published April 2022 in Cell Chemical Biology . When it comes to insect killer P. …
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Learning to Look
… Machine learning approach significantly expands inovirus diversity. To answer the question, “Where’s Waldo?” readers … are stealth agents that can enter and exit through the cell membrane without lysing the bacterial host. They can … said virologist Mart Krupovic of the Institut Pasteur, one of the study co-authors and an expert on inoviruses. …
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Giant Bacteria Found in Guadeloupe Mangroves Challenge Traditional Concepts
… threads in the mix. But in the Petri dish, the thin vermicelli-like threads floating delicately above the leaf debris … visible without the assistance of microscope. “It’s 5,000 times bigger than most bacteria. To put it into context, it … Woyke, who also heads the JGI’s Microbial Program and is one of the article’s senior authors. The team was also …
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Ecogenomics of virophages and their giant virus hosts assessed through time series metagenomics
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A Pleiotropic Flowering Time QTL Exhibits Gene-by-Environment Interaction for Fitness in a Perennial Grass
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Novel major loci shape habitat‐associated flowering time variation in Yellowstone monkeyflowers
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