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MIxS-HCR: a MIxS extension defining a minimal information standard for sequence data from environments pertaining to hydrocarbon resources
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Who We Are
… (JGI) is a national user facility located at Lawrence Berkeley National Laboratory. The JGI consists of around 280 researchers and support staff in the Integrative Genomics Building in Berkeley, California.  Our location at the IGB fosters team …
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An Automated Tool for Assessing Virus Data Quality
… recovered and identified from environmental samples (metagenomes). However, the quality and completeness of … specific guidelines and best practices for characterizing uncultivated viruses. Following up on those guidelines, JGI … effort to develop guidelines and best practices for defining virus data quality. Summary Characterizing viral …
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A Practical Approach to Using the Genomic Standards Consortium MIxS Reporting Standard for Comparative Genomics and Metagenomics
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Enriching public descriptions of marine phages using the Genomic Standards Consortium MIGS standard
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Offerings & Capabilities
Sequencing, Synthesis and Metabolomics. Strong internal collaborations with  Science Programs and  Operations enable …
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Genome Project Standards in a New Era of Sequencing
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Toward a standard in structural genome annotation for prokaryotes
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10 From JGI on the 2019 Highly Cited Researchers List
… a long-term project to sequence, annotate and analyze the genomes of more than 300 Aspergillus Go here to learn more … effort to develop guidelines and best practices for defining virus data quality. Reported in Nature … together virus experts, representatives from the Genomic Standards Consortium (GSC), and the International Committee …
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Declines in ice cover are accompanied by light limitation responses and community change in freshwater diatoms
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Special Initiatives & Programs
… of DE-FOA-0003453, which is eligible for BERSS). Available Resources All JGI products are available through BERSS. Learn more about our  offerings, … economy. Joint BioEnergy Institute , led by DOE’s Lawrence Berkeley National Laboratory: This center concentrates on …
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Fishing for Novel Cellulose Degraders
… biogeochemical cycles, but the vast majority remains uncultivated and unknown. The challenge remains to learn … To validate the predicted cellulases from their captured genomes, the team then used DNA synthesis and cloning, … other than cellulose-degradation to tease out uncultivated microorganisms of interest from complex environmental …
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