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… sample receipt to completion of standard analysis.  Raw data is provided for all sequencing products below. In addition, JGI will submit raw sequence data to  SRA at NCBI once the standard analysis is complete. Raw metabolomics data is submitted to the  MassIVE repository . Not all …

… key role is to design, benchmark, and apply bioinformatics software to enable analysis and interpretation of genomic and metagenomic data for JGI’s user community. She also provides support for … through implementation of advanced analysis pipelines and tools as well as development and implementation of …

… cells of the uncultivated SAR324. The constellation of data gave the team unprecedented resolution to study the … The metagenomes were also processed using the JGI-developed software suite, BBTools , and relying on the JGI Integrated Microbial Genomes …

They can be found in virtually all of Earth’s ecosystems. A software tool  recently described in  Nature Biotechnology  … created by researchers under the direction of Microbiome Data Science Group Lead Nikos Kyrpides at the U.S. … for identifying viruses and plasmids. Until now, most other tools have focused on identifying only specific plasmids or …

… joining the JGI in 2002. Initially focused on building tools to facilitate expert curation of human gene models in … and plants. Working with a talented team of scientists and software engineers, Dr. Goodstein currently leads the Plant … responsible for genome annotation, comparative analysis and data distribution for the JGI's direct collaborators and the …

… so starting from some of the enzymes that we had the most data on and knew the most about, working with my … You can really design your experiments in a way that’s data rich, and you can really just learn so much, which then … with. DAN UDWARY: Yeah. ALISON NARAYAN: And there are other tools that I think are really useful, that again are set up …

… provides advanced genomic capabilities, large-scale data and professional expertise to support the global … and contributing this information freely to the public databases. In 2004, the JGI established itself as a national … in active projects—each year. In addition, several thousand data users worldwide download millions of files.  The vast …