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Fungal & Algal Program
… The program’s fungal genomics research explores new metabolic processes and enzymes that can be applied in … biocontrol agents dramatically affect plant health. The  1000 Fungal Genomes Project is a five-year project to … sampling of fungi, laboratory analysis and genomics data exploration. …
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10 From JGI on the 2019 Highly Cited Researchers List
… 2019 list of Highly Cited Researchers , which includes 10 affiliated with the JGI . The 2019 list focused on Highly … Lead Dan Rokhsar , Molecular Biology & Genetics Staff Data Scientist Asaf Salamov, Plant & Animal Science category … guidelines and best practices for defining virus data quality. Reported in Nature Biotechnology, the work brought …
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DOE Metrics
… available hours. Other DOE Quarterly Metrics Q1 – Report on new computational developments for improving microbial, … capabilities to analyze complex genomic or metagenomic datasets. [Download PDF] Q3 – Report on new computational …
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Network Modeling of Complex Data Sets
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Partnerships: Myco-Ed
… train students and professors in laboratory techniques and data analyses compile original data for improving fungal genomic resources empower students through isolation and genome sequencing of new fungal species.  Students collect fungi, sterilize … Beyond providing a scalable solution for production of high-quality fungal reference genomes, this program is an …
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FICUS Overview
… free to the PI by the Department of Energy’s funding of the JGI. There is no cost to the user and no granting of funds. All data is made publicly available in accordance with  JGI’s Data Policy . In cases where the JGI provides customized … All proposals undergo technical review by JGI staff as well as staff at the other participating …
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Statement on the Use of Genomics Data
… of genomics through open access to resources and promoting data sharing to accelerate discovery and maximize the … the publication date, whichever comes first. For nearly 40 years, the International Nucleotide Sequence Database … indicates the data should be publicly released. Over the next several weeks, the JGI will be in contact with JGI PIs …
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Data Discovery Tool Helps Identify Microbial Roles within Metagenomes
… within the Integrated Microbial Genomes and Microbiomes (IMG/M) platform — has been developed to help inform … mSystems paper , a team at the DOE Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … Neighbor (KNN) Classification. LDA is a supervised data compression technique that was used to take the …
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Twenty-five years of Genomes OnLine Database (GOLD): data updates and new features in v.9.
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Integrating Experimentation with Data
… $700    Thanks for joining the Joint Genome Institute (JGI) and the Environmental Molecular Sciences Laboratory … Automated Laboratories: Integrating Experimentation with Data” was held at the Seattle Marriott Waterfront in … and Synthetic Biology AI/ML-enabled Laboratory Automation, Data Integration and Modeling This three-day joint meeting …
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Offerings & Capabilities
… The central mission of the JGI’s Genomic Technologies department is   ensuring users … capabilities to help advance their science by generating data in three overarching categories: DNA Sequencing , … in strain engineering and functional assays and supporting new methodologies to enhance the integration of various data …
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Next generation sequencing data of a defined microbial mock community
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