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Natural Prodcast Episode 7: Ben Shen
… well. One is to do DNA sequencing. So upon sequencing many genomes, now we don’t have to, as in the past, go randomly … product chemistry? BEN:  Yeah. So, I was trained as a plant natural product chemist. When I first started in graduate school, I was working on terpenoids, plant natural products, and what really fascinated me – the …
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Natural Prodcast Episode 3: The Primer, Part 3
… for a long time by many, many bacteria – and fungi and plants. And so that’s the power and the promise of, I guess, … we can find more things. Turns out some of the early genomes that were sequenced for, say, Streptomyces – they … transcriptomics, metabolomics, and natural products in plants, fungi, and microorganisms. If you want to …
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Partners
… with the HudsonAlpha Institute for Biotechnology for our Plant Program, and is further leveraging the services of the … Genomics Institute for DNA and RNA extractions to support plant and other efforts. The JGI works closely with DOE …
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Natural Prodcast Episode 6: Marc Chevrette
… the secondary metabolism side of things was looking at genomes and seeing where the really hard things to sequence … As a host, and a little bit of my newer work is focused on plants, but in both cases, you know, these molecules are how … human use. So things that we might be able to use against plant pathogens to use in agriculture and animal husbandry. …
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Better Crops With a Pointillist Approach to Plant Genomics
In this episode, we peer into plant cells. Researchers are using measurements from single cells to understand which genes help plants grow, get nutrients, weather drought, and more. And …
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Picking Up Threads of Cotton Genomics
… the cotton fields look like popcorn is literally growing on plants, with fluffy white bolls bursting out of the green … biology and lead to higher yield and improved fiber while reducing input costs. Growers, the textile industry, and … ask to take on these projects due to their difficulty and complexity, but we have been extremely pleased with Jeremy, …
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Filling in the Plant Tree of Life
What if we understood plants and how they adapt to their ever-changing … food, medicine, and bioenergy crops. But most available genomes are from narrow swaths of the plant tree of life. One project aims to change that. …
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Programs & Platform Leads
… drive innovations that cross the boundaries of the Plant, Fungal, Algal, Microbial, Metagenome, Metabolomics, …
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JGI@25: Strengthening Soybean
… but soybean ( Glycine max ) also has the advantage of reducing the need for nitrogen fertilizer. These impressive … explain why soybean is a flagship genome of the JGI’s Plant Program.    While soybean has desirable properties as … Sainsbury Institute, by annotating not just one but three genomes for P. pachyrhizi , which are available on MycoCosm …
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Shattering Expectations: Novel Seed Dispersal Gene Found in Green Millet
… (Toby) Kellogg and other researchers at the Danforth Plant Science Center (Danforth Center) drove up and down the … pulling over to the side of the road to collect small weedy plants and bring them back to the lab. The weedy grass was … Program , sequences of several hundred green millet plant genomes were generated, though the final analyses focused on …
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JGI@25: Following Fungi that Pry Apart Plant Polymers
… help solve energy and environmental challenges.   Usually, plants have the upper hand against any kind of biomass … years evolving tactics against potential threats. “Because plants can’t run away, they’ve evolved these really tough … complexes that work like assembly lines for efficiency.  In 2021, her team saw that four strains of anaerobic fungi …
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