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Natural Prodcast Episode 12: Nadine Ziemert
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Metabolic Modeling of Fungi
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Webinar: PhycoCosm Tutorial
… for the answer provided by Sara 4.  Q(uestion): Are all CSP produced data automatically assembled and run through … Q: If we have RNAseq or proteome data that is based on a model that is not based on a genome model with PhycoCosm, … on the synteny page. 7.  Q: What is the success rate for CSP? What makes a successful CSP? A: Reminder: two calls for …
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Building Sphagnum Genomic Resources
… The Science Enabled by the JGI’s Community Science Program (CSP), researchers are developing a number of resources to build up Sphagnum as a plant model system focused on carbon cycling studies, rather than … the ecosystem response to climate change. Through the CSP, researchers are aiming to have two high quality …
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First Monoploid Reference Sequence of Sugarcane
… many crops have multiple sets of chromosomes (they are “polyploid”) and their complex genomes are more difficult to … now underway as part of the JGI Community Science Program (CSP), a critical factor in developing sugarcane as a … sequence generated is 382 Mb; 25,316 protein-coding gene models were predicted with more than 80 percent found to be …
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Recent Activity in Expanding Populations and Purifying Selection Have Shaped Transposable Element Landscapes across Natural Accessions of the Mediterranean Grass Brachypodium distachyon
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Natural Prodcast Episode 3: The Primer, Part 3
… to go ahead and, and synthesize those genes within a model organism like E.coli , and have it produce the …
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Mining New Frontiers: The Critical Minerals and Materials Joint Call
… involving computational work with Dr. Blaby-Haas to model, predict, and understand nanoscale processes …
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Use of Agrobacterium rhizogenes Strain 18r12v and Paromomycin Selection for Transformation of Brachypodium distachyon and Brachypodium sylvaticum
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A Xyloglucan Backbone 6-O-Acetyltransferase from Brachypodium distachyon Modulates Xyloglucan Xylosylation
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Kjiersten Fagnan
… Dr. Fagnan was appointed CIO of the JGI in 2016, and in 2018 was hired to be the JGI’s Data Science and Informatics … and the ASCR Future Computing Methodologies workshops. In 2018, Dr. Fagnan was part of the Gordon Bell prizewinning … Coach – Girls who code, Technovation Gordon Bell Prize, 2018 NERSC, CRD Petascale Postdoctoral Fellow …
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EARLY FLOWERING 3 and Photoperiod Sensing in Brachypodium distachyon
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