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Bacterial Diversity in the Cecum of the World’s Largest Living Rodent (Hydrochoerus hydrochaeris)
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Cocultivation of Anaerobic Fungi with Rumen Bacteria Establishes an Antagonistic Relationship
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Occurrence and expression of genes encoding methyl-compound production in rumen bacteria
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JGI-TMF Critical Minerals and Materials Call
… the Joint Genome Institute and the Molecular Foundry in one research proposal. The program seeks research proposals … address challenges in the sourcing, recovery, and utilization of critical minerals and materials. For accepted … customized analysis, the JGI also participates in publication of results. Go here for additionial information, …
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JGI@25: Studying Sorghum’s Survival Skills
… In honor of the JGI's 25th anniversary in 2022, we have … number of notable achievements that showcase our collaborations and capabilities to enable great science that will help solve energy and environmental challenges. Sorghum stands out as a candidate …
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JGI@25: Expanding Metagenomics to Capture Viral Diversity
… In honor of the JGI's 25th anniversary in 2022, we have … culture. Beginning in the early 2000s , these environmental metagenomes began to offer a window into viral existence. … over 125,000 partial and complete viral genomes. That study multiplied the number of known viral genes by a factor …
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Mining Metagenomes for Cas Proteins
… to accurately edit genomes (that is, repair gene mutations, and either delete or add genes in a precise fashion) has applications across many areas. In particular, gene … author Lucas Harrington was a graduate student from study senior author Jennifer Doudna’s lab, and he worked …
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Comparative Genomics of Rumen Butyrivibrio spp. Uncovers a Continuum of Polysaccharide-Degrading Capabilities
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Cultivation and sequencing of rumen microbiome members from the Hungate1000 Collection
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Targeted and shotgun metagenomic approaches provide different descriptions of dryland soil microbial communities in a manipulated field study
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Methane yield phenotypes linked to differential gene expression in the sheep rumen microbiome
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Doubling Down on Known Protein Families
… Using a novel computational approach, researchers confirm microbial diversity is … — worse, they didn’t even know how big the room is.  A new study  published online Oct. 11, 2023 in  Nature highlights … (IMG/M) database, they successfully crafted the Novel Metagenome Protein Families (NMPF) Catalog.  “We can now …
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