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Engagement Webinar: What Can You Do With An Approved CSP Functional Genomics Call Proposal?
… exist back then,” said Hal Alper, a University of Texas at Austin professor, “but we really first heard about the JGI … call, and he noted the data had driven his lab’s focus on guide RNA library generation and development and its … feasibility first. Prospective users are always welcome to contact one of us about possible proposals if it’s different …
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Styling for Safety: PPE, It’s the JGI Way
… is worn to minimize exposure to hazards that can cause workplace injuries and illnesses.  PPE or Personal … is worn to minimize exposure to hazards that can cause workplace injuries and illnesses. These injuries and illnesses may result from contact with chemical, biological, physical, mechanical, or …
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Rice SNP-seek database update: new SNPs, indels, and queries
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Statement on the Use of Genomics Data
… data policies. Since completion of the HGP, the JGI has sustained its commitment to uploading sequence data generated … to private status. This will remove records from search indexes and BLAST databases until such time that JGI … released. Over the next several weeks, the JGI will be in contact with JGI PIs to resolve the status of the available …
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Cultivating Symbiotic Antarctic Microbes
… ecological consequences of microbe-microbe interactions. Using metagenomes recovered directly from environmental … Nanohaloarchaeota were predicted to be capable of autonomous growth because they had larger genome sizes and their … of Nanohaloarchaeota and showed they required cell-cell contact with the Antarctic haloarchaeon  Halorubrum …
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The JGI Data Portal: Improving User Experience
… between the JGI and the information technology company Truss has resulted in the JGI Data Portal , a pilot download … volunteering to participate in a user research session by contacting the JGI User Experience Group — once you complete a short survey, a Group member will contact you regarding UX research opportunities. …
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Len Pennacchio
… Pennacchio joined the DOE Joint Genome Institute and has focused on applying state-of-the-art molecular methods to … at Stanford University where he uncovered the genetic cause of a rare form of human epilepsy and subsequently generated one of the first mouse models for this common neurological disorder. In 1999, …
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Multiplex Editing of the Nucleoredoxin1 Tandem Array in Poplar: From Small Indels to Translocations and Complex Inversions
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Toward More Efficient Artificial Photosynthesis
… The Science Chloroplasts are the factories in plant cells. Using photosynthesis, they take raw materials including … from the atmosphere than current natural processes and use it as a sustainable resource for making high-value bioproducts. As a … Council grant (ERC 637675 ‘SYBORG’), as well as the US Department of Energy Joint Genome Institute, a DOE Office …
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2022 Progress Report
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science user facility at Lawrence Berkeley National Laboratory … Lab), is to become the leading integrative genome science user facility enabling researchers to solve the world’s …
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A More Intuitive Phytozome Interface
… interactive version of the JGI’s plant data portal. On August 6, 2021,  version 12 of Phytozome will be retired, and  … versions at  https://phytozome-next.jgi.doe.gov/jbrowse/index.html How can I access the genome data that was … a successful transition from v12 to v13.  As always, please contact the team at [email protected] with any questions …
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A Collaboration to Improve Plant Genome Annotations Across Species
… It was developed to improve plant genome annotations at the US Department of Energy (DOE) Joint Genome Institute (JGI)*, a national user facility located at Lawrence Berkeley National … even before this was published, and people regularly contact Jeremy [Schmutz] or me to seek more information on …
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