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Dan Rokhsar
Institute in 2000 as the founding Associate Director for Computational Genomics, and led the computational efforts directed towards the sequencing, … Dr. Rokhsar ’s team has continued to develop computational methods applicable to the diverse eukaryotic species, which …
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Nikos Kyrpides
… comparative analysis platforms for microbial genomes and metagenomes (IMG). He became the Metagenomics Program head in 2010 and has the combined Microbial Genomes and Metagenomes Program since 2011. Prior to joining the DOE … on Microbiome Data Science. His group is developing novel methods for enabling large-scale comparative analysis, as …
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Alignathon: a competitive assessment of whole-genome alignment methods
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Reply to: Examining microbe–metabolite correlations by linear methods
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A simple, fast, and accurate method of phylogenomic inference
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MAGI: A Method for Metabolite Annotation and Gene Integration
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A Better Way to Find RNA Virus Needles in the Proverbial Database Haystacks
Team develops a computational pipeline to sift and characterize RNA virus … Berkeley National Laboratory (Berkeley Lab) describe a computational pipeline that can specifically scan for those … would be far more effective in achieving higher quality results compared to smaller individual efforts. This is also …
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Natural Prodcast Episode 19: Bill Fenical
… looking at samples and revising all the media and revising methods. We didn’t spend a lot of time on this because … things are underway. And I hope that once we do get some results, it’ll be really fun to have you on to talk about …
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Improved Assemblies Using a Source-Agnostic Pipeline for MetaGenomic Assembly by Merging (MeGAMerge) of Contigs
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Axel Visel
National Laboratory, he developed and applied novel computational and experimental sequence-based methods for elucidating the gene regulatory landscape of … Cell Reports, Nature Structural and Molecular Biology, PLoS Computational Biology , Nucleic Acids Research . Over 80 …
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Assembling the Marine Metagenome, One Cell at a Time
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Omega: an Overlap-graph de novo Assembler for Metagenomics
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