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… 2020 collaborative FICUS projects. Through the Facilities Integrating Collaborations for User Science (FICUS) program, … Genome Institute (JGI)—have selected 11 proposals for support from 53 received through a joint research call. … influences the soil microbiome and biochemical reaction networks, and also assessing the role of viruses in the soil …

… strengthens -omics technologies at the JGI by identifying the actual molecules present in an environment that influence system behavior.  Through … experimental samples, including organisms (e.g. microbes, fungi, plant), media in which they grow, as well as … Find more details on the instrumentation we use and our …

… Analysis reveals cotton genome stability across global lineages . Come harvest time, the cotton fields look like … two varieties: 95 percent of what is grown is known as Upland cotton ( Gossypium hirsutum ), while the remaining 5 … Biotechnology. “The goal has been for all this new cotton work, and even the original cotton project was to try to …

… Over the course of the summer, the JGI-UC Merced Genomics Internship paired six UC Merced students with seven JGI … Doing the JGI internship has given me a great experience working intermediately between academia and industry, which … outside of the area of focus of most of the rest of the group, which made it feel like I had something tangible to …

… RIViT-seq technology could speed up associating transcription factors with their target … particularly sigma factors that initiate transcription in bacteria. Using this technology, which combines an in vitro … RIViT-seq expand the known transcriptional regulatory network in bacteria, enabling the discovery of regulatory …

… Tracing gene regulatory networks in the model fungus  Neurospora crassa . The Science A … The Impact N. crassa is the model organism for filamentous fungi, all of which contain a wide array of plant cell-wall … Summary Filamentous fungi are like handymen who show up at a job site for a task that requires a flathead …

… Before 2006, Olpidium was one of the many obscure fungi of Chytridiomycota (the “chytrids”).  A collaborative … al . In both studies, however, Olpidium was unexpectedly grouped with non-flagellated terrestrial fungi, but not with … with various origins, ranging from fungi, plants to bacteria. Back in 2011 when these genome and transcriptome …

… Kerrie Barry or Vivian Ng Prokaryotic projects: Tijana Glavina del Rio , Danielle Graham , or Miranda Harmon-Smith DNA … You can visit the Products & Offerings section of our website for more details, including a downloadable pdf of products categorized by …

… with less fertilizer. For millions of years, underground fungi have lived in symbiosis with plant roots. Plants … organisms share space at cellular scale: fungi stretch a network of tendrils called arbuscules into a plant’s root … have been able to study both sides of this interaction up close, using RNA sequencing to understand gene …

… 11, 2022, in Cell Genomics , the team focused on Actinobacteria ( Actinomycetota ), a group of bacteria with diverse metabolic activities. Found in … a researcher can easily procure a culture for follow up work, but also maintains various bioinformatic tools and …