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Microbial communities associated with sympagic and planktonic habitats during a polar vortex influencing the North American Great Lakes Basin
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Products
… The JGI has diverse capabilities in: DNA and RNA sequencing, Sample and library preparation, Biodesign and pathway engineering Mass spectrometry based metabolomics Below is a … Q1  (median/75th percentile*) DNA Synthesis Constructs <5kb in size Single gene or multiple small genes assembled to …
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DAP-seq Drives Robust Mapping of Gene Regulation
… view of plant evolution and adaptation.    Understanding how genes are regulated is like deciphering the complex wiring behind a city’s power grid. Just as … 10 species ranging from grasses to broccoli and trees like poplar, spanning about 150 million years of evolution,” said …
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A Collaboration to Improve Plant Genome Annotations Across Species
… To provide broad plant genomic capabilities, the DOE Joint Genome Institute works in partnership with the HudsonAlpha Institute for …
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Enlarging Windows into Understanding Gene Functions
… JGI innovates protocol revealing how genetic variations in sequences affect traits. In a text file, the rows of … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at …
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2022 Progress Report
… Pictured is a timelapse of the Integrative Genomics Building (IGB) seen above is home to the DOE Joint Genome Institute (JGI). Researchers from the DOE Systems …
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Webinar: MycoCosm Tutorial
… Learn more about JGI’s  MycoCosm data portal , an interactive collection of sequenced fungal genomes, omics … Do you accept oomycetes to be proposed for genome sequencing, or only “true fungi”? A(nswer): Our focus is on fungi, … on the scientific questions asked and whether they are within DOE mission areas of bioenergy, carbon cycling, and …
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Webinar: PhycoCosm Tutorial
… Learn more about JGI’s  PhycoCosm data portal , an interactive collection of sequenced algal genomes, omics … your Tree ever differ from NCBI Taxonomy? A(nswer): If you find that our trees are incorrect or need to be changed, please contact us and we’ll … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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Webinar: SIP technologies at EMSL and JGI
… Molecular Sciences Laboratory (EMSL) and the Joint Genome Institute (JGI) provide access to a variety of tools that … carbon and nutrient flux, and identify microbes assimilating labeled compounds. During this webinar, EMSL’s Mary … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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An Earth Month Look at Sustainability Efforts at the JGI
… Sustainable Berkeley Lab maintains a  calendar of Earth Month events throughout April. This year, a new group at the Lab, the Sustainable Garden Club, hosted a DIY Succulent Workshop and … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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Katherine Louie
… Dr. Louie joined the JGI in 2014 to develop the metabolomics program, and in 2019 became Platform Lead where she manages metabolomics … B.S in Biomedical Engineering, Johns Hopkins University; Ph.D. in Bioengineering, … 1. Swift CL, Louie KB, Bowen BP, Olson HM, Purvine SO, Salamov A, et al. Anaerobic gut fungi are an …
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From Competition to Cooperation
… Tracking evolution of symbiotic lifestyles across multiple fungal lineages. The Science By comparing 135 fungal sequenced genomes, researchers were able to … The project was funded by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, …
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