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Natural Prodcast Episode 20: Brian Bachmann
… Natural Prodcast. I’ve got two things I wanted to tell you about in this introduction. First and foremost, our … screening methods, genome mining in cave microbiomes, and using engineered biosynthetic pathways and enzyme systems to … was less nutrients but enough that you had a lot of biodiversity. So we choose environments that are close enough …
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Project Management Office
… The JGI Project Management Office carries out a number of … to facilitate world-class science. PMO works with users, JGI scientists and technical staff to onboard users and guide them through the process of working with our facility. This includes help with: … synthesis – the DOE requires that all work performed in its User Facilities be covered by the User Agreement. …
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JGI-TMF Critical Minerals and Materials Call
… free to the PI by the Department of Energy’s funding of the JGI. There is no cost to the user and no granting of funds. All JGI data is made publicly … Go here for additionial information, including a Q&A, about the call.   … Proposals should be submitted through the Molecular Foundry User Portal . All proposals undergo technical review by JGI …
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Partnerships: Myco-Ed
… Myco Ed Fungal Genomics Education Project MycoCosm MycoEd group page Protocols, teaching materials and bioinformatics … DNA is extracted from samples, which is then sent to the JGI for genome sequencing, assembly and annotation. … analysis.  MycoCosm provides data and tools via a graphical user interface, ensuring that no programming knowledge or …
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JGI@25: Expanding Metagenomics to Capture Viral Diversity
… will help solve energy and environmental challenges. Viruses are everywhere — in soil, the sea and, of course, the … the microbes there,” said Simon Roux , the Viral Genomics Group Lead at the JGI.  To understand the microbiome systems … aspect of viruses in the environment — their sheer genetic diversity. As pioneers of this field, the JGI has leveraged …
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Natural Prodcast Episode 21: Elizabeth Parkinson
… should be coming out on the first Thursday of the month, just like I promised. Now I just have to make this whole … Chemistry and Molecular Pharmacology there. We talked about several different pieces of her work, including … University of Illinois at Urbana-Champaign. And, when I was working with him, I was working on the natural product …
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User Support
… the JGI will move to a new login service, requiring the use of an ORCID account with two-factor authentication … with DOE JGI Science Program leads Solicit user feedback about your overall experience working with the JGI. Find out more about our Project …
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Events
…  Learn about meetings the JGI is hosting:   … our researchers will be presenting next. Go here to learn about upcoming user-focused webinars and workshops we're hosting. …
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How to Submit Sequencing Samples
… needed to prepare and ship samples for sequencing by the JGI.  Additionally it includes instructions on accessing sample-level reports and tracking statuses.  Please follow the steps outlined below. Click the drop-downs to learn more about each step in the process. If you have any questions, …
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Frequently Asked Questions: Project Management
… The majority of JGI projects come from the user community. Find out about JGI’s calls for proposals , and submit your proposal … The “User” signing the JGI User Agreement will be an authorized … and if no additional signatures are required. Learn more about User Agreements and additional required documentation …
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Special Initiatives & Programs
… Overview The JGI provides sequencing, synthesis, and targeted … BER Funding Opportunity Announcements ,  Science Focus Areas  (SFA) opportunities, and the  Office of Science … All JGI products are available through BERSS. Learn more about our  offerings, capabilities and products . A minimum …
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Expanding Virophage Diversity
… Virophages are small viruses with double-stranded DNA genomes that co-infect … the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science facility, have increased the … the team concluded, “we provide a global analysis of the diversity, distribution, and evolution of virophages.” Lead …
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