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Fields of Breeders’ Dreams: A Team Effort Toward Targeted Crop Improvements
… Gardeners and farmers around the country recognize that crop … best in certain regions. Most plant species have adapted to their local environments; for example, crop and … crops. One example is an ongoing collaborative effort to improve the emerging bioenergy crop switchgrass ( Panicum …
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User Executive Committee
… The UEC represents the JGI user community and is responsible for providing input and advice on JGI … and the annual user meeting. The UEC also acts as a liaison to the user community and the broader scientific community, and promotes communication and collaboration within the user community. …
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A Plant Root Atlas for Tracking Developmental Trajectories
… A collaborative team led by Geoffrey Schiebinger at the … User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab). “This represents the largest integration of single-cell datasets in plants and provides a foundation for still larger efforts in …
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Synthetic Biology Lab
… The Synthetic Biology lab is divided into a DNA synthesis production group and a synthetic biology … combinatorial libraries.  We have developed and continue to improve automated assembly pipelines bringing in new … For further details, please reach out to the Group Lead …
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Alabama Agricultural & Mechanical University Internship Program
… 2024 was a year of firsts, including the flagship internship … Alabama Agricultural & Mechanical University and the Joint Genome Institute. AAMU students spent two months in … their scientific skills and collaborating with their mentors and fellow interns. Inspired by the success of the UC …
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Natural Prodcast Episode 6: Marc Chevrette
… DAN: You’re listening to the US. .Department of Energy Joint Genome Institute’s … two prongs and one of those prongs is through a tight-knit collaboration with JGI to do genome sequencing, so to look … Episode Transcript … This is Episode 6 of Natural Prodcast, our conversation with Marc Chevrette, a …
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The More the Merrier: Making the Case for Plant Pan-genomes
… Brachypodium model system traces polyploid genome evolution. Flowering plants abide by the concept, “the more the merrier,” with respect to their genomes. In their base state, they are diploids … The U.S. Department of Energy Joint Genome Institute, a DOE Office of …
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
… A new view into a symbiosis could offer benefits to address climate … Lab). Specific understanding of this symbiosis could offer improvements in multiple directions. On the fungi side, … the Joint BioEnergy Institute (JBEI). Cole led the work in collaboration with JBEI as part of the 2021 Laboratory …
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Partners
… The JGI leverages its existing partnerships and develops others providing complementary expertise to advance the science and serve as impact multipliers . The … their capabilities through the Facilities Integrating Collaborations for User Science (FICUS) program.     …
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Webinar: MycoCosm Tutorial
… Learn more about JGI’s  MycoCosm data portal , an interactive … fungal genomes, omics data and comparative analysis tools. Questions and Answers 1.  Q(uestion): Do you accept … download file formats are predefined but can certainly be improved in future developments of the portal. 14.  Q: Has …
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PlantSEED enables automated annotation and reconstruction of plant primary metabolism with improved compartmentalization and comparative consistency
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Improving Microbial Genome Annotations in an Integrated Database Context
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