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The More the Merrier: Making the Case for Plant Pan-genomes
… Brachypodium model system traces polyploid genome evolution. Flowering plants abide by the concept, “the more the merrier,” with respect to their genomes. In their base state, they are diploids with two genome … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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Viruses Reprogram Cells into Different Virocells
… Microbial cells infected by viruses undergo metabolic … infections cause significant metabolic changes in marine microbes, the answer is no. They refer to the infected … changes they’ve undergone. The Impact The number of microbes in, on, and around the planet is an astronomical …
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The Megadata of Lake Mendota – Part 3: Boating Out to David Buoy
… This is the third and final episode of our series on a giant metagenome assembly from Wisconsin’s Lake Mendota. In the last two episodes, we’ve covered …
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Characterizing Communities: JGI Announces Latest CSP Portfolio
… Proposals aim to sequence and annotate genomes from Antarctica to … Science Program of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user … of France’s Institut de Biologie. His team proposed to sequence  Chaetoceros microalgae, or diatoms. Through the …
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Statement on the Use of Genomics Data
… The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is … the HGP, the JGI has sustained its commitment to uploading sequence data generated on behalf of its user community to … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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Len Pennacchio
… In 2003, Dr. Pennacchio joined the DOE Joint Genome Institute and has focused on applying state-of-the-art molecular … Len Pennacchio is the JGI's Deputy of Genomic Technologies. oClick to learn more about the offerings and capabilities we offer JGI users to help advance …
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Fungal Friends or Foes in Plant Roots
… Uncovering associations between plant roots and fungi that can help … but they’re not always immediately apparent. Similarly, the microbes found in plant roots may have unknown roles. Some … from natural Arabidopsis populations around Europe. The JGI sequenced and annotated 41 fungal isolates from the …
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User Support
… Notice Effective July 27, 2026, the JGI will move to a new login service, requiring the use of an ORCID account with two-factor …
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A Model System for Perennial Grasses
… Panicum hallii genomes offer insights to drought tolerance. … Through the JGI’s Community Science Program , JGI sequenced and assembled near-complete genomes of P. hallii … complete) and P. hallii var. filipes (94.8% complete) and resequenced a host of natural collections from across the …
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Near-Complete Genome Sequence of Zygosaccharomyces rouxii NRRL Y-64007, a Yeast Capable of Growing on Lignocellulosic Hydrolysates
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Evolution of novel wood decay mechanisms in Agaricales revealed by the genome sequences of Fistulina hepatica and Cylindrobasidium torrendii
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Draft Nuclear Genome Sequence of the Halophilic and Beta-Carotene-Accumulating Green Alga Dunaliella salina Strain CCAP19/18
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