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Comparative transcriptomics as a guide to natural product discovery and biosynthetic gene cluster functionality
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TbasCO: trait-based comparative ‘omics identifies ecosystem-level and niche-differentiating adaptations of an engineered microbiome
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Mycoparasites, Gut Dwellers, and Saprotrophs: Phylogenomic Reconstructions and Comparative Analyses of Kickxellomycotina Fungi
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The draft genome sequence of the ascomycete fungus Penicillium subrubescens reveals a highly enriched content of plant biomass related CAZymes compared to related fungi
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Genomewide annotation and comparative genomics of cytochrome P450 monooxygenases (P450s) in the polypore species Bjerkandera adusta, Ganoderma sp. and Phlebia brevispora
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10 From JGI on the 2019 Highly Cited Researchers List
… Animal Science and Molecular Biology & Genetics categories Microbial Systems research group lead and User Programs … Salamov were part of a team that presented the first large analysis of an Aspergillus fungal subgroup, section Nigri. … a long-term project to sequence, annotate and analyze the genomes of more than 300 Aspergillus Go here to learn more …
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JGI Earth Month: The Unusual Metabolism That Helps Plants Withstand Drought
… In April 2020, we mark both the 50th celebration of Earth Day on … I recently caught up with Karolina at the Plant and Animal Genomes, or PAG conference, when in-person meetings were … them to be able to pull that water through the whole plant system, they need to open these pores in their leaves called …
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Integrative visual omics of the white-rot fungus Polyporus brumalis exposes the biotechnological potential of its oxidative enzymes for delignifying raw plant biomass
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High-resolution phylogenetic microbial community profiling
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Metagenomic Sequencing of an In Vitro-Simulated Microbial Community
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Dynamic root exudate chemistry and microbial substrate preferences drive patterns in rhizosphere microbial community assembly
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Webinar: SIP technologies at EMSL and JGI
… at JGI and EMSL such as DNA-SIP, Protein SIP, Flux Balance analysis with metabolites, Isotope Ratio Mass Spectrometry, … can harvest the sample, then we can put it into the laser system 7. Q: Can radioactive isotopes be used at EMSL? A: … don’t have a great way to resolve root respiration from microbial processes, but we’re not mixing the tracer with …
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