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Fishing for Novel Cellulose Degraders
… by Tanja Woyke at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … the researchers also hooked and were able to reconstruct a high-quality draft co-assembled genome for a new genus level … The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is …
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In Hot Spring Microbial Mat, Viruses Ride “Piggyback”
… lysogeny, they can insinuate themselves inside the host’s genome, living quietly and replicating with their host … National Laboratory, used single-cell sequencing to sequence both a cell’s genome and detect accompanying viral … sequence data) can suggest different predatory behaviors. A high relative abundance of virus can suggest a so-called …
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JGI-USCCN Strain Sequencing Opportunity
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RECAP: Multi-Omic Journeys with 2023 JGI Annual Meeting Keynotes
… 21-23, 2023, attendees joined the JGI Annual Genomics of Energy & Environment Meeting.  A wide array of invited … address of the 2023 JGI Annual Meeting. As the JGI’s Metagenome Science Program Head, Emiley Eloe-Fadrosh, introduced … these amazing technologies that the JGI has to identify and sequence who’s making what, that the context at a microscale …
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New Research Sheds Light on Diversity in the Deep Sea
… get any sunlight, and yet they still support a unique array of microorganisms adapted to living in extreme conditions. … across five oceanic regions. In doing so, they found a high degree of variability in the types of microorganisms … Scientists with the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility at …
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Cultivating Symbiotic Antarctic Microbes
… in understanding the genomic basis and ecological consequences of microbe-microbe interactions. Using metagenomes recovered directly from environmental samples and … by the JGI. Transmission electron microscopy (TEM) provided high resolution images confirming the  Hrr. lacusprofundi  …
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An Age of CRAGE: Advances in Rapidly Engineering Non-model Bacteria
… that allows researchers to quickly modify diverse bacterial genomes. In 2019, the JGI’s Yasuo Yoshikuni and his team  … ( CRAGE ). CRAGE enables scientists to insert large pieces of DNA (up to 60 kb) in a single step, directly into the … domesticate some 60 strains, inserting into them a genetic sequence that acts as a “landing pad.” Mouncey adds, “Once …
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Dealing with Drought: Uncovering Sorghum’s Secrets
… uncover the mechanisms behind sorghum’s capacity to produce high yields despite drought conditions. The field experiment … Laboratory, and the U.S. Department of Energy Joint Genome Institute (JGI), a DOE Office of Science User … conventional food crops. For that reason, its genome was sequenced by the JGI in 2009 and it is considered to be …
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Sequencing and Analysis of the Entire Genome of the Mycoparasitic Bioeffector Fungus Trichoderma asperelloides Strain T 203 (Hypocreales)
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Draft genome sequences of strains CBS6241 and CBS6242 of the basidiomycetous yeast Filobasidium floriforme
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Draft Genome Sequence of Yokenella regensburgei Strain WCD67, Isolated from the Boxelder Bug
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Draft Genome Sequences of the Black Truffles Tuber brumale Vittad. and Tuber indicum Cook & Massee
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