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On July 6, scientists from Lawrence Berkeley National Laboratory (Berkeley Lab) and … participants in an online workshop to harness deep learning for metagenomic data.  Metagenomic data, or DNA sequencing … costly approaches such as BLAST and hidden Markov models (HMMs), “You just compute the distance between two …

Kasey Markel and Patrick Shih (UC Berkeley and the Joint BioEnergy Institute) are looking for new ways to engineer plants. So they’ve looked into wasps that program oak trees …

As set out in the JGI Five-Year Strategic Plan – “Beyond Basepairs, A Vision for Integrative and  Collaborative Genome Science” – through … technology, engineering, and mathematics (STEM) workforce. In doing so, it is our ambition to further develop a …

A preview of how large-scale single cell genomics complements metagenomics … approaches including amplicon and metagenomic sequencing. For example, they showed that the composition of the … recent years, advances in sequencing technologies and bioinformatic tools have helped decode the genomes of tens of …

Dr. Blow joined the JGI in 2009, and currently heads the User Support Analysis group. He … the lead of the User Support Analysis group. The group performs custom analysis and develops automated pipelines for … board member for Scientific Reports … Education … Selected Publications … Awards and Service …

Schulz joined the DOE Joint Genome Institute in 2016 and is leading the New Lineages of Life Group. His research … discovery pipeline and enrichment metagenomics for terrestrial protists. These approaches enable novel … academic achievements (2008) … Education … Selected Publications … Awards and Service …

With a new methodology, scientists are now getting more complete genomic results from single … the  genomes of microorganisms is incredibly useful for understanding the microbiome of the earth, but most …

Kjiersten Fagnan began working with JGI in 2012 as a NERSC bioinformatics computing consultant, after completing a petascale … … About the JGI Chief Informatics Officer … Selected Publications … Awards and Honors …

For the first time, a team has comprehensively described … the predator-prey dynamics in these mats helps constrain models that estimate biogeochemical fluxes. Summary Previous … No. DE-AC02-05CH11231. JRS is supported by the NASA Astrobiology Institute Rock Powered Life grant. RS is supported …

Register here Book your stay at the conference venue This inaugural event will bring … of standardized fabricated ecosystems (EcoFABs) designed for precise manipulation and reproducible experimentation of … we will explore cutting-edge advancements in constructing, modeling, and applying these engineered ecosystems across …

Specializing in mass spectrometry-centered projects, Dr. Bowen’s work focuses on developing high-performance computing workflows and integrating mathematics and chemistry for advanced analysis, modeling, and data integration. Dr. Bowen’s expertise in … Google Scholar. … Education … Awards and Honors … Selected Publications …

April marks both the 50th celebration of Earth Day on April 22, and … living on a changing planet. Mo Kaze is a University of California (UC), Merced graduate student working with  Susannah … Community Structure and Methane Production in California’s Canal System,” focuses on anthropogenic impacts on …