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Congratulations to Jane Grimwood, who has been appointed the Loretta Purdy … large-scale multi-institutional JGI projects and resulting publications that Grimwood contributed to include: A 2021 … of human chromosome 19 The DNA sequence and comparative analysis of human chromosome 5 The sequence and analysis of …

… (DOE JGI), a DOE Office of Science user facility, Keedrian Olmstead was back on campus at the University of … experience in cutting-edge genome research and apply experimental and computation tools to solve research … says. “Many academic labs don’t know how to analyze RNA-Seq data very well, sending it out to companies. I’ll take that …

Uncovering associations between plant roots and fungi that can help or harm plant host health. … roots with genomes from other plant-associated fungi. Their analysis identified fungal gene families that help determine … isolates from the collection. The team then compared this dataset against nearly 80 previously published fungal …

On July 30, UC Merced students and their JGI mentors toasted to the end of a nine-week … preceded by short final presentations attended by more than 75 JGI staff. According to Axel Visel and Zhong Wang, … opportunity to learn valuable professional skills like time management and presentation skills.  “This program is so …

… reprogramming. The Science If it looks like a duck and quacks like a duck, so the adage goes, it must be a … and The Ohio State University’s Matt Sullivan used an experimental approach with a marine phage-host model to … was done by the JGI, and proteomics and metabolomics analysis and microscopy at EMSL. The team infected the …

… of several production pipelines (gene calling, functional annotation and methylomics) that run on microbial genomes and metagenomes. He also works on automating intra-department data exchange and assists with large scale computations on …

RIViT-seq technology could speed up associating transcription factors with their target genes. The Science … environments are expressed when their functions are needed. Data yielded through RIViT-seq expand the known … bioinformatically is almost impossible, and the experimental process for doing so is laborious and complex. …

Mr. Everson rejoined the JGI in 2020  and leads all aspects of JGI Operations which include the … Institute and the Operations Deputy for LBNL’s Biological Systems & Engineering Division. Prior to his tenure with … and acts on behalf of the JGI Director in day-to-day management and planning related to the JGI’s infrastructure …

Clarivate Analytics, formerly the IP & Science arm of Thomson Reuters, … Lead Dan Rokhsar, Molecular Biology & Genetics Staff Data Scientist Asaf Salamov, Plant & Animal Science category … Salamov were part of a team that presented the first large analysis of an Aspergillus fungal subgroup, section Nigri. …

… program between the DOE Joint Genome Institute (JGI) and University of California (UC), Merced. What started with … Internship co-founder Axel Visel and UC Merced Quantitative Systems Biology professor Carolin Frank reflected on the … their perspectives and views” helped her further develop management and supporting skills for the students. Being …

… for bioinformatics internship opportunities in fields ranging from plant-microbe interactions to functional … and Systems Biology Mentor: Guohong Wu, Plant Comparative Analysis What effect has your summer internship with the JGI … I got to work with an enormous set of fungal genomics data. For me, it was an opportunity to adapt my existing …