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Virus-Microbe Interactions of Mud Island Mangroves
…   Later this year, Ian Rambo, a graduate student in Brett Baker’s lab at the University of Texas at Austin, … laboratories or national user facilities. Baker had worked with the JGI through a Community Science Program … by Susannah Tringe, head of the Microbial Systems group. He also worked with Simon Roux and David Paez-Espino. …
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JGIota: Looking Back at Sequencing for Soybeans
… a crop that could boost biofuels and fertilize fields. So in 2010, the JGI helped publish the original genome sequence … that threatens this important crop. Hear more about that work from researchers Gary Stacey (University of Missouri), … Peter van Esse (The Sainsbury Laboratory) and Sebastien Duplessis (INRAE). …
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A Plant Root Atlas for Tracking Developmental Trajectories
… A collaborative team led by Geoffrey Schiebinger at the University of British Columbia, Philip Benfey … the information with previously published datasets. The work was  recently published in the journal  Developmental … Axel Visel provided a broader perspective:  “ This exciting work is well aligned with the JGI’s growing efforts in …
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John Vogel
… Dr. Vogel joined JGI in 2014 to establish a plant functional genomics … model for the grasses. In addition to this fundamental work, he established an efficient switchgrass transformation … plants interact with their microbiomes. In addition, his group conducts comparative genomic research to understand the …
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Draft genome sequences of two bacterial type strains isolated from a methanogenic bioreactor: Ruminiclostridium sufflavum DSM 19573T and Anaerosphaera aminiphila DSM 21120T
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Designer DNA: JGI Helps Users Blaze New Biosynthetic Pathways
… enabled by the JGI DNA Synthesis Science Program. Fashioning DNA outside a cell is key to interrogating what genes do, how they work, and applying them to environmental and energy … Science Program , the JGI enables large-scale synthesis support, sequencing, integrative -omics, and data mining, …
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Frederik Schulz
… Dr. Frederik Schulz joined the DOE Joint Genome Institute in 2016 and is leading the New Lineages of Life Group. His research is focussed on the discovery of novel bacterial, archaeal and eukaryotic microbes and viruses in … University of Vienna (Austria) PhD Microbial Ecology and Bioinformatics, University of Vienna (Austria) …
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Toward More Efficient Artificial Photosynthesis
… Chloroplast mimic a platform to capture and utilize carbon in a synthetic fixation cycle. The Science Chloroplasts are … a step toward an artificial photosynthetic cell. The work is part of a long-term effort to capture and utilize … at Lawrence Berkeley National Laboratory (Berkeley Lab). Supporting the Erb lab through the CSP Functional Genomics …
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Data Discovery Tool Helps Identify Microbial Roles within Metagenomes
… Protein annotations provide insights into environmental … protein-coding annotations in all IMG metagenomes. The work is of interest to the Department of Energy (DOE) Office … over 12,000 metagenomes from diverse environments and grouped those with similar microbial communities together. …
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JGI announces second round of 2023 New Investigator awardees
… [above] Emma Bell, Mallory Choudoir, Sneha Couvillion, Tobin Hammer, Christina Hazard, Rachel Mackelprang, Brook Moyers, Mei, Ran,; … Torralbo, Luis Felipe Valdez-Nuñez  The JGI is eager to work and share our tools with a widening circle of …
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Nigel Mouncey
… Dr. Mouncey joined the DOE Joint Genome Institute in 2017 as the fourth … and fermentation processes for vitamins, insecticides, fungicides, platform chemicals, cosmetics and new crop … as JGI Director, Dr. Mouncey leads his own science group at JGI focused on secondary metabolites. He is also on …
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Benjamin Cole
… Dr. Cole is interested in studying how plants interact with their environment. Prior to joining the Joint … of California, San Diego (PhD, 2011) Rensselaer Polytechnic Institute (B.S., 2006) … Implementation of the Index of Cell Identity as an R package …
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