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… Science Altiarchaea are carbon-fixing microbes and targets of multiple viruses in Earth’s deep subsurface. They are … at virus infections. Their genomes include short DNA sequences that code for CRISPR systems, which help bacteria … are using Altiarchaea as a model system to study virus-host interactions. Approximately 150 archaeal viruses had been …

… just one research proposal. Guest speaker Michelle O’Malley of UC Santa Barbara talked about how her approved FICUS … support, how much help can users expect for data analysis of the different omics analysis? Are users expected to be trained to handle the … integrated high-throughput sequencing and computational analysis that enable systems-based scientific approaches to …

… Joint Genome Institute (JGI) provide access to a variety of tools that leverage stable isotopes to measure carbon and … at JGI and EMSL such as DNA-SIP, Protein SIP, Flux Balance analysis with metabolites, Isotope Ratio Mass Spectrometry, … The more the better. We want to put at least a microgram of DNA in the tube so you’d need at least 2 micrograms in …

… In honor of the JGI's 25th anniversary in 2022, we have revisited a … to provide a cataloged and curated culture and genome sequence resource of rumen microorganisms . Thanks to the … in themselves. For example, a few organisms originally sequenced in the Hungate1000 collection harbor enzymes that …

… from similar organisms, researchers have gained insights on why the dry rot ( Serpula lacrymans ) is so destructive in … plant mass for conversion to sustainable, alternative biofuels and bioproducts. This study lends insights on how the … Serpula species, S. himantioides from Europe, that was sequenced and analyzed by the JGI. The researchers found …

… A new view into a symbiosis could offer benefits to address climate change: pulling atmospheric carbon into soil and boosting biofuel feedstocks with less fertilizer. For millions of years, underground fungi have lived in symbiosis with … integrated high-throughput sequencing and computational analysis that enable systems-based scientific approaches to …

… in  Microbiome , researchers from the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office … increased the number of known high quality virophage genome sequences 10-fold through computational approaches. By … including over 28,000 unique MCP sequences.  Further analysis led to the identification of 328 “high quality” …

… than 20 UC Merced students have contributed to the research of 13 JGI scientists since the program’s inception. In 2014, … a project scientist in Visel’s Genomics of Plant-Microbial Interactions Group who has mentored several of the students … the difficult early stages, so I can begin biological analysis of the data sooner than I anticipated.” In her …