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Ray Turner Completes Last Tour of Lab Duty at JGI
… constant for the Joint Genome Institute. On July 1, 2020, that all changed. Ray’s vigilant stewardship as JGI’s … constant for the Joint Genome Institute. On July 1, 2020, that all changed. Ray’s vigilant stewardship as JGI’s … said Director Witherell in his event remarks. “I feel that is something crucial to our success, and Ray has been …
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JGI@25: Building a Better Bean
… in 2022, we have revisited a number of notable achievements that showcase our collaborations and capabilities to enable great science that will help solve energy and environmental challenges. … sequenced and analyzed the genome of the common bean. That work was published online June 8, 2014 in the journal …
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Scaling Up Existing Skill Sets
… to gain experience in a non-academic research environment that is also distinct from private industry. I really liked … rewarding challenges. Also, my work touched on phenomena that were outside of the area of focus of most of the rest … JGI summer internship opened the door for me in the sense that I learned many different tools in bioinformatics …
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An Earth Month Look at Sustainability Efforts at the JGI
… in half, relative to its 2015 baseline emissions.  Reaching that goal will mean slashing direct emissions from energy, … as well as embodied emissions. “So these are emissions that were made in creating goods and performing services,” … disposal.  To minimize emissions from the disposal end of that lifecycle, there’s a specific push going on at the JGI …
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Dealing with Drought: Uncovering Sorghum’s Secrets
… products.  Sorghum bicolor (L.) Moench is an African grass that adroitly handles droughts, floods and poor soils. This is the first paper that describes sorghum’s response to drought, from a … marginal lands not usable for conventional food crops. For that reason, its genome was sequenced by the JGI in 2009 and …
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Fungus Fuels Tree Growth
… sequenced and annotated for this study. The team found that, unlike pathogenic or mycorrhizal fungi (mutualist symbionts that induce structural changes in plant roots),  M. elongata  doesn’t have as many gene products that directly influence plant phenotype, such as secreted …
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The JGI Data Portal: Improving User Experience
… team. Based on Google Analytics data, the team noticed that a large percentage of Phytozome users who were seeking … thoughts — they’ll help us build a solid knowledge base that may inform future updates to one (or more) of the JGI … high-throughput sequencing and computational analysis that enable systems-based scientific approaches to these …
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Calculating the Costs of Multiple Switchgrass Gene Copies
… Scientists have discovered that the candidate bioenergy feedstock switchgrass has … a DOE Office of Science User Facility, has discovered that the candidate bioenergy feedstock switchgrass has … the questions they asked – and answered – in the study that recently appeared in the Proceedings of the National …
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Celebrating a Decade of Science through the JGI-UC Merced Genomics Internship Program
… has brought invaluable insights, thoughts, and explorations that has led to groundbreaking science and opportunities to … one. It’s proven to be a really good model for us that we try and continually replicate.”  On the other side, … “life changing” for the interns and loved the opportunities that the program provides. He mentioned working with …
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Better Genome Editing for Bioenergy
… is a powerful, high-throughput gene-editing tool that can help scientists engineer organisms for bioenergy … make the right cut, researchers created a set of guide RNAs that were effective against 94 percent of the genes in a … Yarrowia lipolytica to identify essential genes and genes that lead to increased lipid production. These insights …
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JGI-KBase Panel at SACNAS
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Green Algae Reveal One mRNA Encodes Many Proteins
… in eukaryotes was long held to be monocistronic – that is, a single gene makes messenger RNA, which encodes a … in eukaryotes was long held to be monocistronic – that is, a single gene makes messenger RNA, which encodes a … high-throughput sequencing and computational analysis that enable systems-based scientific approaches to these …
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