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JGI@25: Expanding Metagenomics to Capture Viral Diversity
In honor of the JGI's 25th anniversary in 2022, we have revisited a … and a specific microbial host to replicate. Sequencing genetic material directly from samples sidesteps these … began to offer a window into viral existence. Along with highlighting the viruses in a given sample, metagenomics …
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Uri Neri
Neri is a computational biologist who spends his days wrangling viral genomes and occasionally remembering to document … just "spicy messenger RNA", and that somewhere in the mess of genetic sequences lurks the next cool virus – if only our …
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Trent Northen
… is currently a Senior Staff Scientist at Berkeley Lab. Since joining Berkeley Lab in 2008, Dr. Northen has had … Genome Engineering Enables Rapid Activation of Biosynthetic Gene Clusters. Nat Microbiol. 4(12):2498-2510. doi: … … Metabolomics Science Program … Education … Selected Publications … Awards and Honors …
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Draft genome and description of Consotaella salsifontis gen. nov. sp. nov., a halophilic, free-living, nitrogen-fixing alphaproteobacterium isolated from an ancient terrestrial saline spring
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Honey Bee Gut Microbiota Divvy Up Dinner
Scientists find bee gut microbes have a division of labor when it comes to metabolizing complex … — cupids of the plant world facilitating the remixing of genes in the next generation of flowering vegetation. In …
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Alabama A&M Interns Access An Abundance of Knowledge
In 2024, the DOE Joint Genome Institute and Alabama A&M University piloted an … mentors Yi Zhai and John Vogel on researching the effects of Brachypodium distachyon plant root exudates on the plant … is Dr. Yi Zhai, and I’m currently working on the effect of plant root exudates in the rhizosphere and microbiome. …
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Arboriscoccus pini gen. nov., sp. nov., an endophyte from a pine tree of the class Alphaproteobacteria, emended description of Geminicoccus roseus, and proposal of Geminicoccaceae fam. nov.
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A Shrubbier Version of Rubber
… one tree species: Hevea brasiliensis . It’s great at producing latex that becomes rubber, but it’s vulnerable to disease and climate shifts. So researchers are looking into a desert shrub that’s native to North America: …
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Tina Clarke
Ms. Clarke joined the Lab in 2007 as the Sr. Human Resources Division … Sonoma State University. Early on Tina knew the importance of understanding human and group behaviors as her role in HR … Era of Networks (Sybase Acquired Company), Pacheco, CA HR Generalist, 1999 – 2000 TriNet VCO, San Leandro, CA HR …
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Marianne Buscaglia
… researcher who uses metagenomics to study giant viruses in cold marine environments and is interested in analyzing genes that can impact the metabolism of their hosts. …
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Crops as Tough as World Cup Turf
In our warming world, we’ll need corn, sorghum and other crops to grow well in worse conditions: with more heat, less water and less fertilizer. Grasses do better in these conditions, so plant biologists James Schable, …
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Ray Turner Completes Last Tour of Lab Duty at JGI
… last 15 years, Ray Turner has been one constant for the Joint Genome Institute. On July 1, 2020, that all changed. … as a typical monthly JGI All-Hands Meeting, after a couple of perfunctory items, the agenda went off the rails – … genomics in support of DOE missions related to clean energy generation and environmental characterization and cleanup. …
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