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How to Target a Microbial Needle within a Community Haystack
… and then efficiently retrieve and characterize their genomes. The Impact Despite great strides in generating genome sequences for members of the microbial world through bulk … be applied in a number of ways including gathering a more complete view of a population’s genetic makeup and …
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JGI Scientists Pen Genome Watch Articles
… more to come in 2020. Researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … Institute in the UK — a nonprofit that was founded to help sequence the human genome. Today, the Sanger Institute … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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The Genetically Remote Pathogenic Strain NVH391-98 of the Bacillus cereus Group Is Representative of a Cluster of Thermophilic Strains▿ †
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An Automated Tool for Assessing Virus Data Quality
… CheckV can help researchers assess virus sequence fragments and data quality. The Science Through … recovered and identified from environmental samples (metagenomes). However, the quality and completeness of metagenome-assembled virus sequences vary … The work conducted by the U.S. Department of Energy Joint Genome Institute is supported by the Office of Science of …
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RECAP: Multi-Omic Journeys with 2023 JGI Annual Meeting Keynotes
… address of the 2023 JGI Annual Meeting. As the JGI’s Metagenome Science Program Head, Emiley Eloe-Fadrosh, introduced … her point. “Things have one or another function that completely depends on the context and oftentimes a single … these amazing technologies that the JGI has to identify and sequence who’s making what, that the context at a microscale …
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Honey Bee Gut Microbiota Divvy Up Dinner
… Scientists find bee gut microbes have a division of labor when it comes to metabolizing complex … can yield sugar monomers, it’s only with the aid of specialized bacterial enzymes. Honey bees rely on their gut … including collecting and analyzing the honey bee gut metagenome, which was done with the help of the US Department of …
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Model Fern Reveals Insight into DNA Thievery in Ferns
… Open Green Genomes hits milestone with C. richardii The Science Fern … — making it difficult to grasp a deeper understanding of fundamental aspects of fern biology and, more broadly, … richardii marks the first published manuscript of a genome sequence generated through the OGG. For a long time, C-fern …
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Frigoriflavimonas asaccharolytica gen. nov., sp. nov., a novel psychrophilic esterase and protease producing bacterium isolated from Antarctica
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Supercomputing, MetaHipMer and the Mega Dataset of Lake Mendota
… before. In 2006, the JGI produced 33 billion base pairs of sequence; by 2023, that number was almost 717 trillion. … to enable large-scale analysis. The story of a massive metagenome assembly for a time-series experiment from the … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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JGI on the 2021 Highly Cited Researchers List
… influence in their chosen field or fields through the publication of multiple highly cited papers during the last decade.” … team that combined field data with a reference switchgrass genome to associate climate adaptations with switchgrass …
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Draft genome of Rosenbergiella nectarea strain 8N4T provides insights into the potential role of this species in its plant host
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Draft Genome Assemblies of Ionic Liquid-Resistant Yarrowia lipolytica PO1f and Its Superior Evolved Strain, YlCW001
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