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IMG Group
… annotation and analysis of (meta)genomic, (meta)transcriptomic, and functional genomic data and serving them to users … species specificity of single cells and genomes extracted from metagenomes, and also as a metric for quality control … sequenced at the JGI. IMG/M is also open to scientists worldwide for the annotation, analysis, and distribution of …
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Bacteria and Fungi Divvy Up the Work in Forest Floor
Bacterial enzymes play second fiddle to those from fungi when it comes to breaking down tough … are not specific enough for a microbial community like that from a temperate coniferous forest floor — which Baldrian’s …
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JGI@25 RECAP: 2022 Annual Meeting features historical perspectives on JGI’s 25 years
… featured speakers who shared a look back at the JGI’s history, from its beginnings in the sequencing for the Human Genome … and the communities of science you serve and enable, it’s really the science. With very rare exceptions, scientific …
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Introducing New Members of the JGI User Executive Committee
The JGI welcomes three new members to the JGI User Executive Committee (UEC) : Roland … nine other JGI users already serving on the UEC – go here to view the full roster of members. Each of the researchers had particular reasons for wanting to serve on the UEC. Hatzenpichler, who studies …
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High-Quality Draft Genome Sequence of Fischerella thermalis JSC-11, a Siderophilic Cyanobacterium with Bioremediation Potential
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Streamlining Regulon Identification in Bacteria
… technology could speed up associating transcription factors with their target genes. The Science Regulons are a … the third is determining the 5’-ends by 5’-end sequencing, from which those promoter sequences recognized by a given … experimentally verified in S. coelicolor . With results from the research, RIViT-seq data have increased the …
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Trent Northen
… 2015, he founded what is now the JGI Metabolomics Program to provide advanced metabolomic methods available to JGI users.  Dr. Northen’s research is focused on using metabolomics to link genomes with environments to understand how webs of …
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In Hot Spring Microbial Mat, Viruses Ride “Piggyback”
… of infecting different host species? Or, do they tend to specialize, infecting just a single host? Another wrinkle … their host indefinitely. Now, in studying a microbial mat from Cone Pool in Mono County, California, scientists have … had been infecting the cell. The team assembled 130 genomes from their sample — a small proportion of the sample’s …
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A Complex Confection Decoded: Sugarcane Reference Genome
… reference quality genome and now crop researchers can work toward advancing sugarcane biotechnology. The Science Considered the world’s most harvested crop by tonnage, sugarcane accounts … to future environmental conditions. Additionally, insights from the genome could help scale sustainable sugarcane …
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Comparing polysaccharide decomposition between the type strains Gramella echinicola KMM 6050T (DSM 19838T) and Gramella portivictoriae UST040801-001T (DSM 23547T), and emended description of Gramella echinicola Nedashkovskaya et al. 2005 emend. Shahina et
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High-quality-draft genome sequence of the fermenting bacterium Anaerobium acetethylicum type strain GluBS11T (DSM 29698)
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Draft genome sequence of Actinotignum schaalii DSM 15541T: Genetic insights into the lifestyle, cell fitness and virulence
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