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UC Merced Interns Reflect on Their JGI Summer Projects
… Over the course of eight weeks this past summer, 10 students from UC Merced … and develop presentation skills as well as build their network in the field of genomics and scientific research. The … language processing techniques to categorize genetic information. Learn more about their work here in a series of …
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JGI-Enabled Research Demonstrates the Existence of New Methane-Makers
… New studies show methanogenesis is not exclusively for Euryarchaeota. Atmospheric levels of methane, a potent greenhouse gas, regulate Earth’s … in its natural environment, scientists have shown at least two microorganisms from different phyla are capable of … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science …
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Sequencing the fungal tree of life
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Genome sequence of the palaeopolyploid soybean
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The trajectory of microbial single-cell sequencing
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ClaMS: A Classifier for Metagenomic Sequences
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You Can Move, But You Can’t Hide
… seek to replicate themselves and spread from cell to cell. Two of the most common forms of MGEs are viruses and plasmids. … MGEs based upon their gene content and their genetic sequences. The software was created by researchers under the … The U.S. Department of Energy Joint Genome Institute …
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Finding the Fermenters
… researchers built an interactive and comprehensive database of fermentative prokaryotes. The Science Most organisms use … the range of bacteria and archaea that rely on this form of metabolism, researchers recently compiled a list of … of five previously uncharacterized prokaryotes, including two bacteria isolated by their lab. KBase was used to …
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JGI Interns at UC Merced Earn CAMP Merit Awards
… As part of the ongoing partnership between DOE JGI and UC Merced to promote diversity and inclusion in science and research, two undergraduate students from UC Merced recently had … Gutierrez Huerta and Bryan Rangel Alvarez, both California Alliance for Minority Participation (CAMP) students …
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An Enzyme Family that Helped Shape Nitrogen Metabolism on Our Planet
… characteristics — creating many different ways of processing nitrogen. To boost crops more efficiently in … to the way many organisms function, they have a sense of why nitrogen metabolisms can be so varied.  As evolution has … It’s useful to differentiate these enzyme tools into two groups: core metabolism and specialized metabolism.  For …
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JGI announces second round of 2023 New Investigator awardees
… is eager to work and share our tools with a widening circle of researchers. That’s why twice each year we look for novel research projects — aligned with DOE missions and …
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Len Pennacchio
… Joint Genome Institute and has focused on applying state-of-the-art molecular methods to address wide-ranging … Scientist at Lawrence Berkeley Laboratory, and Adjunct Professor at UC Berkeley. Dr. Pennacchio received his Ph.D in 1998 from the Department of Genetics at Stanford University where he uncovered the genetic cause of a …
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