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JGIota: Looking Back at Sequencing for Soybeans
… The soybean is a crop that could boost biofuels and fertilize fields. So in 2010, the JGI helped publish the original genome sequence for the soybean, Glycine max. With a full genome sequence, …
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The Genome of the Acid Soil-Adapted Strain Rhizobium favelukesii OR191 Encodes Determinants for Effective Symbiotic Interaction With Both an Inverted Repeat Lacking Clade and a Phaseoloid Legume Host
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Rex Malmstrom
… and leader of the Microscale Applications group. Before joining the JGI in 2010, he made the first ever … of Technology he developed a high throughput approach for isolating individual bacterial cells and amplifying … these microbes in the lab. After joining the JGI, he formed the Microscale Applications group to operate a …
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River microbiomes from around the world: Kelly Wrighton
… Kelly Wrighton and her group at Colorado State University in Fort Collins have a massive undertaking: sequencing the …
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Emiley Eloe-Fadrosh
… samples to identify and characterize genomic information from uncultivated microbes and viruses. Prior to joining the JGI, she was a Bioinformatics Program Fellow at the Gordon and Betty Moore … training in human microbiome research at the Institute for Genome Sciences at the University of Maryland School of …
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A Plantiful Future: Xiaohan Yang
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2025 Progress Report
… demonstrate how their laboratory and data science efforts support users, advance foundational science and enable …
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UC Merced Interns Reflect on Their JGI Summer Projects
… language processing techniques to categorize genetic information. Learn more about their work here in a series of … virtual events and technology enabled a fruitful experience for mentors and students alike. Tools like Slack, Google … career in genomics, and to help foster a diverse future workforce in science. Since the program’s inception, more than …
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How Maize Makes An Antibiotic Cocktail
… revealed that just a handful of enzymes are needed to transform zealexins and related precursors into a bonanza of … the protective function of zealexins and related compounds for other plants, including those cultivated for bioenergy. The zealexin synthesis pathway may be …
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Supporting Global Research into Actinomycetes
… The 500 species described within the group are responsible for roughly two-thirds of antibiotics, and a deeper understanding of the bacteria potentially holds the key to discovering new antiviral medicines and treatments for infectious disease. Streptomycetes are also abundant in …
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A More Intuitive Phytozome Interface
… of 250 plant genomes and has been under active development for over 5 years, provides users with the genome browsers, … attempted to make sure users will continue to have straightforward access to all the data in Phytozome v12, and that … bookmarked v12 links (e.g., to gene reports and organism information pages) will be seamlessly forwarded to Phytozome …
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From Competition to Cooperation
… to carry out a broader analysis than had ever been done before to look at how multiple forest fungi have independently evolved to establish … Summary There are three types of fungal saprotrophs in the forest. White rot can break down the cellulose, … Genomics Initiative (CSP # 305), Metatranscriptomics of Forest Soil Ecosystems project (CSP # 570) and the 1000 …
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