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… in  Microbiome , researchers from the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office … available metagenomic datasets in JGI’s  Integrated Microbial Genomes & Microbiomes (IMG/M) data suite—which includes  IMG/VR (for Virus)—for the virophage marker gene MCP, they were able …

Stable Isotope Probing (SIP) is a powerful technique for studying microbial communities. These experiments can … SIP labwork and analysis can be very demanding.  The JGI offers SIP analysis to make these experiments accessible to … the goal is to generate SIP data that can be useful to multiple teams and analyses. This episode, Rex Malmstrom …

Chloroplast mimic a platform to capture and utilize carbon in a synthetic fixation … (MPI) for Terrestrial Microbiology and the University of Bordeaux have developed a platform that mimics … cell, from capturing and fixing carbon dioxide to generate multi-carbon compounds through a light-driven process. The …

… and semiconductor equipment manufacturer KLA-Tencor before joining the JGI in 2002. Initially focused on building … regions of interest and gene copy number variation across multiple genomes.  eLife 11, e78526. Li et al., 2021.  Plant … plant genomics.      Nucleic Acids Research 40, D1178. Publications … Scientific Advisory Board member, InterMine …

Find a series of webinars related to our Integrated Microbial Genomics & Microbiomes portal. …

… a graduate student in Brett Baker’s lab at the University of Texas at Austin, will defend his dissertation. Some of … Rambo’s work was overseen by Susannah Tringe, head of the Microbial Systems group. He also worked with Simon Roux and … the SCGSR research experience was “an ideal opportunity for me to get real-world experience.” As he finalizes his …

… remembering to document his code. At JGI, he develops tools for viral discovery and analysis, with a particular fondness … viruses – though he'll take a look at anything related to microbial parasites. When not debugging pipelines, he can be … just "spicy messenger RNA", and that somewhere in the mess of genetic sequences lurks the next cool virus – if only our …