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Analysis of clock-regulated genes in Neurospora reveals widespread posttranscriptional control of metabolic potential
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Yasuo Yoshikuni
Dr. Yasuo Yoshikuni has been head of the DNA Synthesis Science Program since 2015. The mission of this program is to … … DNA Synthesis Science Program … Education … Selected Publications … Awards and Honors …
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Dealing with Drought: Uncovering Sorghum’s Secrets
Over 40 percent of the cereal crop’s genes respond to drought stress. … that adroitly handles droughts, floods and poor soils. This is the first paper that describes sorghum’s response to … nearly 400 root and leaf samples and helped analyze the sequencing datasets. The results from the first year showed …
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Party in the Rhizosphere
There’s a party in the soil, and microbes are the VIPs. They’re feasting on the … through their roots, creating a lively zone called the rhizosphere. In this episode, biologist Jennifer Pett-Ridge …
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
A new view into a symbiosis could offer benefits to address climate change: pulling … with plant roots. Plants provide photosynthesized carbon, while fungi deliver water and nutrients. In order to do so, … to study both sides of this interaction up close, using RNA sequencing to understand gene expression: one of the first …
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Tanja Woyke
After studying the mechanism of action of antifungal natural products and their … was the symbiont community of a gutless oligochaete for which she deciphered function and host-symbiont interplay … User Programs … Education … Awards and Service … Selected Publications …
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Metabolic analysis of the soil microbe Dechloromonas aromatica str. RCB: indications of a surprisingly complex life-style and cryptic anaerobic pathways for aromatic degradation
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User Advisory Committees
US Department of Energy (DOE) Joint Genome Institute (JGI) commit to Lawrence Berkeley National Lab’s (Berkeley Lab’s) core values, which guide the relationships we nurture in our workplace and … management and strategic objectives of the microbial and metagenome programs. The committee serves as the program's …
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JGI Announces 2025 New Investigator Portfolio
Pictured from left: [Top] Bill J. Baker, Jeff Barrick, Ian Gilman, Louis Graf, Yuxi Guo, Shaomei He, Vayu Hill- Maini, Forrest Lefler, Pok Man (Bob) Leung and Huang … such as metatranscriptomics and environmental DNA sequencing to explore microbial and plant interactions …
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The Genomes OnLine Database (GOLD) v.5: a metadata management system based on a four level (meta)genome project classification
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The metagenome of the marine anammox bacterium ‘Candidatus Scalindua profunda’ illustrates the versatility of this globally important nitrogen cycle bacterium
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Microbial Metagenomes Across a Complete Phytoplankton Bloom Cycle: High-Resolution Sampling Every 4 Hours Over 22 Days
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