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SIPs with Standards
Stable Isotope Probing (SIP) is a powerful technique for studying microbial communities. These experiments can show which … -- more reproducible, more reusable, and more insightful, for the future of studying microbial communities.   …
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IMG Webinar Series
Find a series of webinars related to our Integrated Microbial Genomics & Microbiomes portal. …
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Virus-Microbe Interactions of Mud Island Mangroves
Rambo’s work was overseen by Susannah Tringe, head of the Microbial Systems group. He also worked with Simon Roux and … the SCGSR research experience was “an ideal opportunity for me to get real-world experience.” As he finalizes his … as a computational biologist. My primary future goal is to form a startup.” …
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The Structure of CcmP, a Tandem Bacterial Microcompartment Domain Protein from the β-Carboxysome, Forms a Subcompartment Within a Microcompartment
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Genome sequencing of four Aureobasidium pullulans varieties: biotechnological potential, stress tolerance, and description of new species
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What Happens Underground Influences Global Nutrient Cycles
… projects. Through the Facilities Integrating Collaborations for User Science (FICUS) program, two Department of Energy … DOE Joint Genome Institute (JGI)—have selected 11 proposals for support from 53 received through a joint research call. … Nevada mountain range since 2014 to learn more about the microbial responses and feedbacks to warming through the …
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The More the Merrier: Making the Case for Plant Pan-genomes
Laboratory (Berkeley Lab), relied on a model grass system for answers. Their work  recently appeared in  Nature … small genomes, short life cycles and can be easily transformed, traits that make them easy to work with bioinformatically and in the laboratory. “We are fortunate …
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Uri Neri
… remembering to document his code. At JGI, he develops tools for viral discovery and analysis, with a particular fondness for RNA viruses – though he'll take a look at anything related to microbial parasites. When not debugging pipelines, he can be …
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The Genomes OnLine Database (GOLD) v.5: a metadata management system based on a four level (meta)genome project classification
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Detection of short-term cropping system-induced changes to soil bacterial communities differs among four molecular characterization methods
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Hiroshi Otani
H, Mouncey NJ. New keys to unlock the treasure trove of microbial natural products. Nat Rev Microbiol. 2021 … Mol. Microbiol. 87, 1223-1236. PubMed … Education … Publications …
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JGIota: A Tool to Find the Nomadic Genes that Help Microbes Adapt - geNomad
… behind software that finds plasmids and viruses within microbial genomes. As mobile genetic elements like viruses …
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