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… isolating individual bacterial cells and amplifying their genetic material, thus bypassing the need to culture these … His group also handles the Stable Isotope Probing (SIP) Metagenomics pipeline  that reveals in situ functional … dissertation in life sciences 2006 … Education … Selected Publications … Awards and Honors …

… how crops and model organisms may evolve.  Determining the genetic codes of plants is often challenging because in many … as polyploidy. The multiple copies arise from past genome duplication, which occurs in two basic ways. In … it to any genome of interest.” This figure outlines the general methodology he and Rokhsar came up with: Until they …

… three or more genome copies from additional parents or duplication, also known as “polyploidy,” is common among … of flowering plants multiply. Over time, plants lose many genes after such events, returning their genomes to a … and computational analysis that enable systems-based scientific approaches to these challenges.  DOE’s Office of …

… base are microscopic, photosynthetic algae. But human-induced climate change , a new study suggests, is displacing … microbiomes that influence algal diversity and gene expression. Sailing from pole to pole on four research … and computational analysis that enable systems-based scientific approaches to these challenges.  DOE’s Office of …

… and omics capabilities to enhance understanding of gene and genome function.  Below find a list of the final …

… and how healthy they are, a recent data set  outlined in  Scientific Data connects molecular features to large … Dubbed “the” bioenergy tree, poplars are known for their genetic diversity. They hold economic value as both biofuel … managed through human intervention. By leveraging metagenomics, scientists were able to analyze the DNA of …

A workflow for capturing the genetic make-up of specific uncultivated microbes from … of the microbial world through bulk community sequencing (metagenomics) and single-cell genomics, the vast majority of … users in order to address pressing energy and environmental scientific challenges. … The work conducted by the U.S. …

… approved CSP New Investigator proposal to understand the genetic basis of fungal community assembly on dead wood … Los Alamos National Laboratory. With a background in fungal genetics and evolution, he helps manage the Bacterial-Fungal … well as developing synthetic biology tools that can help produce value-added products from these systems. He’s worked …

From data carpentry to science communications, their schedules were filled with trainings that they later reported … Interns Andrew Lin and mentor Vy Duong, Understanding Key Genes in Photosynthesis Ravikiran Madichetty and mentors TBK … Pathogens Shayna Bennett and mentor Robert Bowers, Mobile Genetic Elements and CRISPR Spacers in the Conifer Needle …

… have the energy to make complex compounds called natural products . Yet, combing through the genomes of four anaerobic … Swift — verified that the fungi expressed biosynthetic gene clusters, which are “building blocks” of natural … The authors acknowledge support from the Center for Scientific Computing from the CNSI, MRL: an NSF MRSEC …