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Genome Sequences of Two Klebsiella pneumoniae Isolates from Different Geographical Regions, Argentina (Strain JHCK1) and the United States (Strain VA360)
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Genome Sequence of Thermotoga sp. Strain RQ2, a Hyperthermophilic Bacterium Isolated from a Geothermally Heated Region of the Seafloor near Ribeira Quente, the Azores
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Single mutation at a highly conserved region of chloramphenicol acetyltransferase enables isobutyl acetate production directly from cellulose by Clostridium thermocellum at elevated temperatures
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Supercharging SIP in the Fungal Hyphosphere
High-throughput stable isotope probing helps ID novel interactions between bacteria … process for studying microbial communities, with results published in the  November 2022 issue of Microbiome . … effects of climate change. The team’s study used samples from the area immediately surrounding AMF’s long filaments, …
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
A new view into a symbiosis could offer benefits to address climate … Cole, senior author of this work. Cole is a research scientist at the U.S. Department of Energy (DOE) Joint … as a reservoir for carbon compounds that plants generate from carbon dioxide they take in. In this way, encouraging …
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Taking Stock of the Known and Unknown Microbial Space
… decades, advancements in sequencing technologies have led to an abundance of microbial genomes becoming available to the global research community.  Published January 17, 2025 in Science Advances , researchers … regulating global nutrient cycles. The information gained from understanding the interactions between microbes, hosts, …
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Learning to Look
… learning approach significantly expands inovirus diversity. To answer the question, “Where’s Waldo?” readers need to … July 22, 2019, in  Nature Microbiology , a team led by scientists at the U.S. Department of Energy (DOE) Joint … now overhauls our perception of this virus group – from minor curiosities they become a prominent component of …
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Operating Expenses
FY2023 Spending Profile The JGI is funded primarily by the DOE Office of Biological and …
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JGIota: Sequencing Shiitakes with David Hibbett
… shiitake mushrooms special. This week, he and 39 collaborators published a paper tracing how these mushrooms have evolved.  …
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The Power of One, Amplified
… single cell genomics by collecting nearly 500 single cells from a single low diversity hot spring sediment sample. … showed that single cell genomics can add significant value to the other commonly used culture-independent sequencing … genomes then amplified and sequenced individually, offering scientists the opportunity to apply population genomics …
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Genome Insider
Genome Insider is a podcast that showcases the work of JGI collaborators in brief forays, connecting audiences with the people … voices in science talk about their groundbreaking research to better understand — and harness — the superpowers encoded …
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Effects of Polar Light Cycle on Microbial Food Web
… with the seasons. The Science Light-harvesting bacteria (phototrophs) in Antarctica’s Ace Lake defy the norm when it … other Antarctic lakes and the nearby Southern Ocean shift from phototrophs to archaea when sunlight becomes scant, Ace … sent to JGI for metagenomic sequencing. A study  recently published in  Microbiome shows that the way nutrients flow …
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