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JGI@25 RECAP: 2022 Annual Meeting features historical perspectives on JGI’s 25 years
As part of the JGI’s 25th anniversary celebration, the 2022 Annual … Environmental Research “There are two kinds of scientific revolutions,” Ari Patrinos opened with this quote from Thomas … on, from the myriad of omics analyses for understanding gene expression in plants and the environment, to the JGI’s …
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Fishing for Novel Cellulose Degraders
A “bait and hook” single-cell genomic approach to bioprospecting. The Science One of the most vital pieces of equipment for fly fishing is a … DNA synthesis and cloning, followed by protein in vitro expression and mass spectrometry-based enzyme activity …
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JGI announces final round of 2022 Functional Genomics awardees
Twice each year, the JGI accepts proposals for state-of-the-art functional genomics research … and omics capabilities to enhance understanding of gene and genome function.  Below find a list of the final …
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Introducing New Members of the JGI User Executive Committee
… serving on the UEC – go here to view the full roster of members. Each of the researchers had their own reasons … user bottlenecks in access, analysis and sharing of JGI-generated data. She is also interested in reaching and … collaborators and other scientific organizations. Fungal biologist Stajich from UC Riverside sees the JGI’s …
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Complete Genome Sequence of the Chemolithoautotrophic Marine Magnetotactic Coccus Strain MC-1▿ †
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JGI Workshop at SIMB NP Meeting
Jan. 7: New Capabilities to Study Secondary Metabolism   Although there are still a large number of secondary metabolites yet to be discovered and their … often due to, for example, tight regulation of biosynthetic gene clusters (BGCs) in native hosts, the complexity of …
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Triggering Morel Fruiting
A collaborative team led by Hao Tan from the Sichuan Academy of Agricultural Sciences in China and involving Francis … an external source.  The work is part of the JGI’s 1000 Fungal Genomes Project, which aims to provide genomic … decomposition by the black morel, as well as the gene-expression programs encoding the biochemical processes …
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Katherine Louie
Dr. Louie joined the JGI in 2014 to develop the metabolomics … efforts to expand the metabolomics capabilities and product offerings for JGI users.  Using cutting-edge mass … T, et al. MAGI: A Method for Metabolite Annotation and Gene Integration. ACS Chem Biol. 2019;14: 704–714. 6. …
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Transcriptome analysis of Aspergillus niger xlnR and xkiA mutants grown on corn Stover and soybean hulls reveals a highly complex regulatory network
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Complete Genome Sequence of the Aerobic Marine Methanotroph Methylomonas methanica MC09
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Giant Bacteria Found in Guadeloupe Mangroves Challenge Traditional Concepts
… the slightly murky waters in the tube look like a scoop of stormwater, complete with leaves, debris, and even … and a co-first author on the study, performed the 16S rRNA gene sequencing to identify and classify the prokaryote. “I … the new organelles named pepins played a role in the evolution of the Thiomargarita magnifica extreme size, and …
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What Happens Underground Influences Global Nutrient Cycles
DOE user facilities EMSL and JGI announce FY 2020 … for User Science (FICUS) program, two Department of Energy (DOE) Office of Science national user … of the JGI’s Flagship genomes. She and her colleagues have generated a high-quality, phenotyped mutant library in …
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