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FinisherSC: a repeat-aware tool for upgrading de novo assembly using long reads
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How Much Do rRNA Gene Surveys Underestimate Extant Bacterial Diversity?
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Assemblathon 2: evaluating de novo methods of genome assembly in three vertebrate species
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Synthetic Biology Lab
The Synthetic Biology lab is divided into a DNA synthesis production group and a synthetic biology applications group. The DNA … the broader community.  We focus our efforts on integrating database mining and sequence design with scaling the …
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Refining the Process of Identifying Algae Biotechnology Candidates
… to summary above^ as well ] The Science The recipe for growing algae as a source of sustainable biofuels seems fairly … involving researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science … sequence and then analyze the genomes and multi-omics datasets for algae that can be used for large-scale …
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JGIota: Looking Back at How Cow Rumen Samples Landed on a Syllabus
Back in 2011, JGI-supported researchers published a paper in the … metagenomics to identify over 27,000 microbial genes. The data from that study is now used across California State University campuses for biotechnology education as part of a course-based undergraduate resource …
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The Megadata of Lake Mendota - Part 2: Souped Up Computing
… series is the story of a giant metagenome assembly from Wisconsin’s Lake Mendota. In this episode: a look at the supercomputing that stitches together large datasets with the assembler program MetaHipMer2. Oak Ridge …
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Proteome reallocation enables the selective de novo biosynthesis of non-linear, branched-chain acetate esters
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Maureen Berg
Maureen is currently developing new high-resolution and high-throughput methods to link uncultivated viruses … new methods, she hopes to expand our understanding of the roles that viruses play in their ecosystems, particularly in …
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Overview of the Genomes OnLine Database (GOLD)
TBK Reddy gives an overview of the JGI's Genomes OnLine Database and why curated metadata matters. …
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Genome Sequence of the Mesophilic Thermotogales Bacterium Mesotoga prima MesG1.Ag.4.2 Reveals the Largest Thermotogales Genome To Date
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Draft Genome Sequences of Five New Strains of Methylophilaceae Isolated from Lake Washington Sediment
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