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… how crops and model organisms may evolve.  Determining the genetic codes of plants is often challenging because in many … it to any genome of interest.” This figure outlines the general methodology he and Rokhsar came up with: Until they … wasn’t completely accurate. “They took every single gene from octoploid strawberry, compared it to other …

… DNA synthesis and cloning, followed by protein in vitro expression and mass spectrometry-based enzyme activity …

… his PhD dissertation defense presentations and beyond. In 2018, a friend of his wife’s passed along an open postdoc …

… discoveries. Unlocking the intricate details of life’s genetic blueprint has long been a significant challenge in genomics. Enter GenomeOcean, a powerful generative model  now available to the global research … an array of microbial life. By leveraging massive user-generated datasets at the JGI and other publicly available …

… user bottlenecks in access, analysis and sharing of JGI-generated data. She is also interested in reaching and … collaborators and other scientific organizations. Fungal biologist Stajich from UC Riverside sees the JGI’s …

… they’d used metagenomics to identify over 27,000 microbial genes. The data from that study is now used across …

… an external source.  The work is part of the JGI’s 1000 Fungal Genomes Project, which aims to provide genomic … our results revealed a striking capability of morel mycelium to acquire carbon from lignocellulosic-abundant matters … decomposition by the black morel, as well as the gene-expression programs encoding the biochemical processes …

… enzymes these fungi use to break down wood, and compares genetic diversity between cultivated and wild shiitake … raphanica and L boryana in the Americas. Tracing these phylogenetic relationships suggests that the shiitake … sequencing were enabled by the Community Science Program (CSP) at the U.S. Department of Energy (DOE) Joint Genome …