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Evaluation of inducible promoter–riboswitch constructs for heterologous protein expression in the cyanobacterial species Anabaena sp. PCC 7120
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Divergent selection and climate adaptation fuel genomic differentiation between sister species of Sphagnum (peat moss).
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Supercharging SIP in the Fungal Hyphosphere
… microorganisms live in complex communities, like within soils or the gut, they are difficult to study individually. … effects of climate change. The team’s study used samples from the area immediately surrounding AMF’s long filaments, …
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JGI at the AGU Fall Meeting
… context for thousands of newly sampled microbial genomes from North American watersheds (Invited)” 4pm CST Convention … controls of nitrous oxide pulses in rewetted forest soils: An integrated -omic and isotopic approach” 12:39pm … D-F poster B45O-1813  : Maggie Bowman, PNNL: “EMSL’s 1000 Soils Project: core collection strategy and data types …
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JGI announces 2024 New Investigator portfolio
… our tools with a widening circle of researchers. That’s why each year we look for novel research projects — aligned with DOE missions and from PIs who have not led any previously-accepted proposals …
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Workforce Development & Education Outreach
… with Biotech Partners to host students transitioning from high school to community college. …
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Jane Grimwood Named HudsonAlpha Genomics Chair
… A 2021 Nature paper announcing a high-quality reference sequence of the complex switchgrass genome , using samples from common gardens growing across the country. The national … paper on the release of the high quality reference genome sequence of green millet ( Setaria viridis ). The team of …
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Supercomputing, MetaHipMer and the Mega Dataset of Lake Mendota
… before. In 2006, the JGI produced 33 billion base pairs of sequence; by 2023, that number was almost 717 trillion. Last year, the JGI surpassed three Petabases of data sequenced — that’s three-quadrillion base pairs of DNA … users — have access to high-quality, assembled datasets from all of this information. The JGI aims to create …
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In Hot Spring Microbial Mat, Viruses Ride “Piggyback”
… viruses run rampant, capable of infecting different host species? Or, do they tend to specialize, infecting just a … their host indefinitely. Now, in studying a microbial mat from Cone Pool in Mono County, California, scientists have … National Laboratory, used single-cell sequencing to sequence both a cell’s genome and detect accompanying viral …
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Engagement Webinar: Accessing NEON’s Environmental Sample Archives, Applying JGI & EMSL Omics Tools
… are due March 17, 2021 for the FICUS proposal call. Q&A from the Webinar: Q(uestion): Can I apply as a postdoc, or … sets. Q:  Does NEON have or plan on collecting RNA samples from soil or surfaces for microbe-focused collections? A: …
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Metabolic analysis of the soil microbe Dechloromonas aromatica str. RCB: indications of a surprisingly complex life-style and cryptic anaerobic pathways for aromatic degradation
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Transcriptional and metabolic stasis define desiccation-induced dormancy in the soil bacterium Arthrobacter sp. AZCC_0090 until water vapor initiates resuscitation
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