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Uri Neri
Uri Neri is a computational biologist who spends his days wrangling viral genomes … viruses – though he'll take a look at anything related to microbial parasites. When not debugging pipelines, he can be … just "spicy messenger RNA", and that somewhere in the mess of genetic sequences lurks the next cool virus – if only our …
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Introducing New Members of the JGI User Executive Committee
JGI User Executive Committee (UEC) : Roland Hatzenpichler of Montana State University, Teresa Pawlowska of Cornell … to help advance JGI efforts aimed at “understanding complex communities and symbioses relevant to the DOI mission.” …
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JGIota: A Tool to Find the Nomadic Genes that Help Microbes Adapt - geNomad
A quick snippet on Antonio Camargo and Simon Roux, a few of the JGI … behind software that finds plasmids and viruses within microbial genomes. As mobile genetic elements like viruses …
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Hiroshi Otani
Genome Institute in 2016, Dr. Otani has been studying secondary metabolism in microbes, particularly actinomycetes. … technologies and methodologies that facilitate discovery of new secondary metabolites. Prior to joining the JGI, he … Mol. Microbiol. 87, 1223-1236. PubMed … Education … Publications …
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A Powerful Technique to Study Microbes, Now Easier
Lawrence Livermore National Lab biologist Jennifer Pett-Ridge collaborated with JGI scientists on an ambitious project: to bring in robots to help process experiments that measure microbial activity in soil. Now, the researchers and robots …
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Tanja Woyke Awarded van Niel International Prize for Studies in Bacterial Systematics
Congratulations to Tanja Woyke, who has been awarded the van … for the triennium 2017-2020! Established by the University of Queensland in 1986, the van Niel Prize recognizes … Woyke as a pioneer in uncovering the hidden diversity of “microbial dark matter”–that uncultured and unknown majority …
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The Soil Blooms Green
Every fall, a mysterious green growth appears on top of farmers’ fields: a microbial community that might be quietly improving the …
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JGI Scientists Pen Genome Watch Articles
… more to come in 2020. Researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office … of Science User Facility located at Lawrence Berkeley National Laboratory, are sharing their expertise in … with an email in 2018.  Tanja Woyke , who leads the  Microbial Program at the JGI, received a message from Andrea …
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MGM Workshop at Fisabio Summer School 2025
Register here The workshop is addressed to students and professionals of biology, biomedical research, the health sciences … will be devoted to training in the use of the Integrated Microbial Genomes & Microbiomes (IMG/M) system, presented by …
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A Collaboration to Improve Plant Genome Annotations Across Species
Joint Genome Institute works in partnership with the HudsonAlpha Institute for Biotechnology, which specializes in genome improvement for plants. As part of that partnership, the JGI and HudsonAlpha researchers led … data from two ecotypes of  Panicum hallii and multiple switchgrass ( Panicum virgatum ) experimental data. Sarah:  …
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Expanding Virophage Diversity
DNA genomes that co-infect eukaryotic cells along with giant viruses. Virophages are small viruses with … in  Microbiome , researchers from the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office … available metagenomic datasets in JGI’s  Integrated Microbial Genomes & Microbiomes (IMG/M) data suite—which …
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JGIota: Looking Back at Methane-Making Microbes
We count on livestock for food and fiber, but raising these animals … bacteria and archaea breaking down plant matter. So since 2010, the JGI has supported researchers studying those microbial methane-makers. Eventually, that could help us …
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