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In Hot Spring Microbial Mat, Viruses Ride “Piggyback”
… sample — a small proportion of the sample’s billions of bacterial and archaeal cells — and detected the virus in 34 hosts or 26 percent of the single cells. Metagenomics sequencing then … suggest viruses are indeed piggybacking their hosts. Though studies in marine environments have detected viruses …
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Exploring the Diversity of the American Prairie’s Switchgrass
… A tall native plant of the North American prairie, switchgrass ( Panicum … of scientists made an ambitious plan to begin to link the plant’s varying traits — height, biomass, hardiness to cold, …
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Corals in Hot Water Get Help From Their Microbes
… a photosynthetic microalgae, and a little-characterized microbiome. When warm waters stress corals, it might be …
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Crops as Tough as World Cup Turf
… less fertilizer. Grasses do better in these conditions, so plant biologists James Schable, Guangchao Sun and Vladimir … to be the same species that covered World Cup pitches in 2022.                     …
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MGM Workshop at Fisabio Summer School
… June 24-28: Module 2/Microbial Genomics & Metagenomics Workshop The workshop is … research results in genomics, metagenomics and the human microbiome. The workshop will train participants in …
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Training the Next Generation of Talent
… Ben Cole on a project involving bacteria in Arabidopsis plant roots. At the same time, Lawrence worked with Nicole … on the genetic mechanisms of chemotaxis in the Arabidopsis microbiome, particularly, how bacteria can be driven toward compounds produced by the plant roots. He is now working in Fabian Filipp’s lab, which …
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JGI on the 2020 Highly Cited Researchers List
… available on the JGI’s  Integrated Microbial Genomes & Microbiomes (IMG/M) platform. Nikos Kyrpides and  Simon Roux … of 135 fungal sequenced genomes to understand how plants and fungi developed symbiotic relationships, and how … host plants to acquire nutrients. The papers appeared in  Studies in Mycology and in  Nature Communications , …
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Engagement Webinar: Harnessing JGI’s Metabolomics Capabilities
… The JGI Engagement Webinar held November 5, 2020 (watch the  video below, captions are available) … measurements of primary and secondary metabolites from plants, microorganisms, and environmental samples using … a limit to identify molecules exchanged between plants and microbiomes during interactions? Is it reliable performing …
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High Five: Celebrating the JGI-UC Merced Genomics Internship Program
… More than 20 UC Merced students have contributed to the research of 13 … Ben Cole, a project scientist in Visel’s Genomics of Plant-Microbial Interactions Group who has mentored several … interactions between microbes and venomous hosts. She also facilitates the non-profit science communication and …
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2023 Progress Report
… expertise to support the global research community in studies of complex biological and environmental systems. We …
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Draft genome sequences of two bacterial type strains isolated from a methanogenic bioreactor: Ruminiclostridium sufflavum DSM 19573T and Anaerosphaera aminiphila DSM 21120T
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When “The Blob” Made It Hotter Under the Water
… are affected by warming events. More time-series studies could help researchers improve predictive models on … such as hurricanes and droughts. Another one began in late 2013, when a large patch of warm ocean water about a third … This preliminary model aligns with several other studies on the potential effects of warming oceans on the …
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