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JGI@25: Expanding Metagenomics to Capture Viral Diversity
… In honor of the JGI's 25th anniversary in 2022, we have … Beginning in the early 2000s , these environmental metagenomes began to offer a window into viral existence. Along … genomes. That study multiplied the number of known viral genes by a factor of 16. The same year, the JGI expanded its …
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Triggering Morel Fruiting
… A collaborative team led by Hao Tan from the Sichuan Academy of Agricultural Sciences in China and involving Francis … annotated by a collaborative team. The genome sequences and annotations are available on JGI’s fungal portal  MycoCosm . … the black morel, as well as the gene-expression programs encoding the biochemical processes unveiled by transcriptomics …
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Novel heavy metal resistance gene clusters are present in the genome of Cupriavidus neocaledonicus STM 6070, a new species of Mimosa pudica microsymbiont isolated from heavy-metal-rich mining site soil
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Designer DNA: JGI Helps Users Blaze New Biosynthetic Pathways
… A special issue of Synthetic Biology celebrates research enabled by the JGI … more than 10 papers, including two Nature Plants publications, in five years, have come out of the … Science program developed thousands of DNA constructs encoding a molecular tool to repress targeted genes in the …
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Comparative genomics of the genus Desulfitobacterium
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Extracting the Secrets of Secondary Metabolites
… for survival, may now be easier to characterize following a proof-of-concept study in which researchers paired CRISPR and … because it allows researchers to delete or activate certain genes and assess how these edits affect functionality.  … The work conducted by the US Department of Energy Joint Genome Institute, a DOE Office of Science …
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In marine Bacteroidetes the bulk of glycan degradation during algae blooms is mediated by few clades using a restricted set of genes
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Natural Variation in Lignin and Pectin Biosynthesis-Related Genes in Switchgrass (Panicum virgatum L.) and Association of SNP Variants with Dry Matter Traits
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Gene and transcript abundances of bacterial type III secretion systems from the rumen microbiome are correlated with methane yield in sheep
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Conservation of linkage and evolution of developmental function within the Tbx2/3/4/5 subfamily of T-box genes: implications for the origin of vertebrate limbs
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A Horizontal Gene Transfer Event Defines Two Distinct Groups within Burkholderia pseudomallei That Have Dissimilar Geographic Distributions▿ †
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Transcriptional response of the white-rot fungus Dichomitus squalens to polysaccharides reveals a co-expression network of plant biomass conversion related genes
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