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The Megadata of Lake Mendota – Part 3: Boating Out to David Buoy
… episode of our series on a giant metagenome assembly from Wisconsin’s Lake Mendota. In the last two episodes, we’ve covered the specialized software and supercomputers …
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Duplications and losses of genes encoding known elements of the stress defence system of the Aspergilli contribute to the evolution of these filamentous fungi but do not directly influence their environmental stress tolerance
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Toasting to the 2020 JGI-UC Merced Summer Internship Program
On July 30, UC Merced students and their JGI mentors toasted to the end of a nine-week virtual internship. The celebration was preceded by short final presentations attended by more than 75 JGI staff. According to Axel Visel and Zhong Wang, founders …
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Honey Bee Gut Microbiota Divvy Up Dinner
… finding that interested the authors was that an evolutionary analysis of  Bifidobacterium strains in honey bees and …   … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence … and environmental characterization and cleanup. The JGI provides integrated high-throughput sequencing and …
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Zhong Wang
Research in the Analysis R&D group focuses on developing new bioinformatics solutions to support JGI in adopting new genomics technologies, scaling up … GPU, Cloud etc) and their applications in solving DOE’s most challenging problems. … PhD Cell Biology. Duke …
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MGM Workshop at Fisabio Summer School 2025
Register here The workshop is addressed to students and professionals of … in this area, by means of theoretical lectures and seminars as well as practical hands-on sessions in … the use of the Integrated Microbial Genomes & Microbiomes (IMG/M) system, presented by Natalia Ivanova and Rekha …
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Improved High-Quality Draft Genome Sequence of the Eurypsychrophile Rhodotorula sp. JG1b, Isolated from Permafrost in the Hyperarid Upper-Elevation McMurdo Dry Valleys, Antarctica
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NeLLi — Symposium on New Lineages of Life
The DOE Joint Genome Institute hosted the hybrid “NeLLi 2023 … expansions of the Tree of Life and latest discoveries toward the evolution of cellular complexity and microbial symbiosis. Further, the symposium showcases cutting-edge experimental approaches, computational …
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Tanja Woyke Awarded van Niel International Prize for Studies in Bacterial Systematics
Congratulations to Tanja Woyke, who has been awarded the van Niel International Prize … Lab), Woyke currently serves as the interim deputy for JGI User Programs. Earlier this year, she was elected to the American Academy of Microbiology (AAM). She has led JGI’s Microbial Genomics Program since 2009 and heads the …
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Complete genome sequence of the thermophilic, hydrogen-oxidizing Bacillus tusciae type strain (T2T) and reclassification in the new genus, Kyrpidia gen. nov. as Kyrpidia tusciae comb. nov. and emendation of the family Alicyclobacillaceae da Costa and
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Synthetic Biology Informatics Group
Software engineers in the Synthetic Biology Informatics Group … develop, deploy, and maintain software that support the JGI’s Synthetic Biology Program .  Representative software … design for assembly by Gibson, Yeast recombination and Golden Gate methods SynTrack and associated tools, which …
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Daniel Udwary
Dr. Udwary serves as a computational biologist for JGI’s Secondary … gene clusters in bacteria and fungi. Prior to joining the JGI, he spent time as a faculty member at the University of …
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