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Viral community analysis in a marine oxygen minimum zone indicates increased potential for viral manipulation of microbial physiological state
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Three Join the JGI User Executive Committee
… Committee (UEC) recently welcomed three new members earlier this month – Sneha Couvilion of Pacific Northwest … lead on PNNL’s Soil Microbiome SFA. She serves as Secretary within the Microbial Ecology Section of the Ecological … investigator who has been an active user of the JGI at any time in the past two fiscal years is eligible for election …
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Microbial co-habitation and lateral gene transfer: what transposases can tell us
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JGI Interns at UC Merced Earn CAMP Merit Awards
… As part of the ongoing partnership between DOE JGI and UC Merced to promote diversity and inclusion in science and research, two … receive from our faculty.” Cristhian and Bryan interned with Zhong Wang and Tanja Woyke, respectively. Both of their …
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Complete Genome Sequence of Methanosphaerula palustris E1-9CT, a Hydrogenotrophic Methanogen Isolated from a Minerotrophic Fen Peatland
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Susannah Tringe Named 2020 DOE Lawrence Award Recipient
… Congratulations to Susannah Tringe , one of eight scientists and … of microbial communities in carbon cycling, in interactions with plants, and as drivers of methane production, nutrient …
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A More Intuitive Phytozome Interface
… foundation for Phytozome v10) back in 2014.  Several components of that codebase are no longer supported, and there … v12 NOT available (via URL forwarding) in v13? A total of 7 genomes present in v12 are not available interactively in … We hope to add several of them soon, but don’t yet have a timeline for their restoration. They include Jalview (for …
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Experimenting with EcoFABs for Student Labs - Jill Bouchard & Ying Wang
… To set up flexible, repeatable experiments on plants and microbes, Trent Northen’s group at Berkeley Lab …
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Multi 'omics comparison reveals metabolome biochemistry, not microbiome composition or gene expression, corresponds to elevated biogeochemical function in the hyporheic zone
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Description of Candidatus Mesopelagibacter carboxydoxydans and Candidatus Anoxipelagibacter denitrificans: Nitrate-reducing SAR11 genera that dominate mesopelagic and anoxic marine zones
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IMITATION SWITCH is required for normal chromatin structure and gene repression in PRC2 target domains
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Enriching public descriptions of marine phages using the Genomic Standards Consortium MIGS standard
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