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Meta-omics survey of [NiFe]-hydrogenase genes fails to capture drastic variations in H2-oxidation activity measured in three soils exposed to H2
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Analysis of the Neurotoxin Complex Genes in Clostridium botulinum A1-A4 and B1 Strains: BoNT/A3, /Ba4 and /B1 Clusters Are Located within Plasmids
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Transposon Mutagenesis Paired with Deep Sequencing of Caulobacter crescentus under Uranium Stress Reveals Genes Essential for Detoxification and Stress Tolerance
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High‐throughput identification of novel heat tolerance genes via genome‐wide pooled mutant screens in the model green alga Chlamydomonas reinhardtii
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JGI announces second round of 2023 New Investigator awardees
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John Vogel
… Dr. Vogel joined JGI in 2014 to establish a plant functional genomics program. Prior to this, he served as a … pipeline and, in collaboration with industrial partners, generated hundreds of transgenic switchgrass lines in an … sequenced mutant collections, transformation technology, epigenetic analysis techniques) and utilizing these resources …
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Yasuo Yoshikuni
… Shen et al., Mitochondrial ATP generation is more proteome efficient than glycolysis., … characterization of a soil viral auxiliary metabolic gene product - a functional chitosanase., Nature Communications , 2023 Zhao …
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Industry Engagement Program
… including User Facilities like the JGI, through its Genesis Mission. Launched in 2025, the initiative aims to … and AI agents to solve key national challenges. The Genesis Mission consortium will connect leading industry and … and assembled physical DNA constructs that can then be functionally characterized.  Our metabolomics platform …
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Boosting Small Molecule Production in Super “Soup”
… to keep processes running smoothly. As reported August 26, 2021, in Nature Communications , researchers led by Hal … (BDO). To do so, the yeasts received fine-tuning of gene expression through genetic rewiring with CRISPR-Cas9 … Genomics of Energy & Environment Meeting on September 1, 2021. Register here to hear him and others.   Byline: Massie …
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How to Target a Microbial Needle within a Community Haystack
… A workflow for capturing the genetic make-up of specific uncultivated microbes from … their genomes. The Impact Despite great strides in generating genome sequences for members of the microbial … makeup and identifying viruses interacting with these populations. Development of this protocol was enabled by the …
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Understanding Wildfire Recovery, Starting in Soil
… across a spectrum of burned soils. By connecting microbial genes with functions useful for forest recovery, this study sheds light … on post-wildfire soil microbiomes have focused on marker gene analyses, which take inventory of which microbes are … This work was supported through a USDA NIFA award (2021-67019-34608) to M.J.W. FTICR-MS analyses were performed …
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Recent Activity in Expanding Populations and Purifying Selection Have Shaped Transposable Element Landscapes across Natural Accessions of the Mediterranean Grass Brachypodium distachyon
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